Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC16.9■□□□□ 0.3
BRCA2P51587 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
BRCA2P51587 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
BRCA2P51587 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
BRCA2P51587 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
BRCA2P51587 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
BRCA2P51587 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
BRCA2P51587 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
BRCA2P51587 PIGL-201ENST00000225609 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
BRCA2P51587 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
BRCA2P51587 LINC00634-202ENST00000505157 222 ntBASIC16.89■□□□□ 0.29
BRCA2P51587 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
BRCA2P51587 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC16.89■□□□□ 0.29
BRCA2P51587 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC16.89■□□□□ 0.29
BRCA2P51587 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
BRCA2P51587 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC16.89■□□□□ 0.29
BRCA2P51587 MFF-204ENST00000353339 2186 ntTSL 5 BASIC16.89■□□□□ 0.29
BRCA2P51587 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC16.89■□□□□ 0.29
BRCA2P51587 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC16.89■□□□□ 0.29
BRCA2P51587 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
BRCA2P51587 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
BRCA2P51587 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
BRCA2P51587 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
BRCA2P51587 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC16.89■□□□□ 0.29
BRCA2P51587 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC16.89■□□□□ 0.29
BRCA2P51587 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
BRCA2P51587 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC16.89■□□□□ 0.29
BRCA2P51587 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC16.89■□□□□ 0.29
BRCA2P51587 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
BRCA2P51587 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
BRCA2P51587 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
BRCA2P51587 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC16.89■□□□□ 0.29
BRCA2P51587 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
BRCA2P51587 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC16.88■□□□□ 0.29
BRCA2P51587 AC092850.2-201ENST00000623821 2697 ntBASIC16.88■□□□□ 0.29
BRCA2P51587 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
BRCA2P51587 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
BRCA2P51587 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC16.88■□□□□ 0.29
BRCA2P51587 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
BRCA2P51587 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
BRCA2P51587 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
BRCA2P51587 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC16.88■□□□□ 0.29
BRCA2P51587 HIST1H2AE-201ENST00000303910 509 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
BRCA2P51587 PMF1-202ENST00000368277 1068 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
BRCA2P51587 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
BRCA2P51587 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
BRCA2P51587 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC16.88■□□□□ 0.29
BRCA2P51587 AC051619.5-201ENST00000559003 736 ntTSL 2 BASIC16.88■□□□□ 0.29
BRCA2P51587 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
BRCA2P51587 NAMA-206ENST00000605377 509 ntTSL 5 BASIC16.88■□□□□ 0.29
BRCA2P51587 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
BRCA2P51587 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
BRCA2P51587 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC16.88■□□□□ 0.29
BRCA2P51587 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
BRCA2P51587 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
BRCA2P51587 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
BRCA2P51587 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC16.88■□□□□ 0.29
BRCA2P51587 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
BRCA2P51587 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
BRCA2P51587 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC16.88■□□□□ 0.29
BRCA2P51587 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
BRCA2P51587 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC16.88■□□□□ 0.29
BRCA2P51587 PRKAR2A-AS1-203ENST00000431705 592 ntTSL 4 BASIC16.88■□□□□ 0.29
BRCA2P51587 AL627230.2-201ENST00000613254 655 ntBASIC16.88■□□□□ 0.29
BRCA2P51587 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC16.88■□□□□ 0.29
BRCA2P51587 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
BRCA2P51587 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
BRCA2P51587 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
BRCA2P51587 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
BRCA2P51587 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
BRCA2P51587 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
BRCA2P51587 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
BRCA2P51587 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
BRCA2P51587 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
BRCA2P51587 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC16.87■□□□□ 0.29
BRCA2P51587 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC16.87■□□□□ 0.29
BRCA2P51587 LSM5-207ENST00000410044 687 ntTSL 3 BASIC16.87■□□□□ 0.29
BRCA2P51587 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC16.87■□□□□ 0.29
BRCA2P51587 LINC01278-201ENST00000433061 529 ntTSL 3 BASIC16.87■□□□□ 0.29
BRCA2P51587 LINC01569-203ENST00000573268 694 ntTSL 3 BASIC16.87■□□□□ 0.29
BRCA2P51587 AC107464.3-201ENST00000609172 737 ntBASIC16.87■□□□□ 0.29
BRCA2P51587 LINC01278-206ENST00000610088 554 ntTSL 4 BASIC16.87■□□□□ 0.29
BRCA2P51587 GCK-209ENST00000616242 2260 ntTSL 5 BASIC16.87■□□□□ 0.29
BRCA2P51587 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
BRCA2P51587 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
BRCA2P51587 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
BRCA2P51587 AC244394.1-201ENST00000435000 1665 ntBASIC16.87■□□□□ 0.29
BRCA2P51587 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.87■□□□□ 0.29
BRCA2P51587 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
BRCA2P51587 AL645937.2-201ENST00000396808 931 ntBASIC16.87■□□□□ 0.29
BRCA2P51587 PSMD4P1-201ENST00000433951 1109 ntBASIC16.87■□□□□ 0.29
BRCA2P51587 AC109479.3-201ENST00000520163 360 ntTSL 3 BASIC16.87■□□□□ 0.29
BRCA2P51587 POU5F1P2-201ENST00000521750 823 ntBASIC16.87■□□□□ 0.29
BRCA2P51587 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16.87■□□□□ 0.29
BRCA2P51587 PCDHA14-201ENST00000506751 2298 ntBASIC16.87■□□□□ 0.29
BRCA2P51587 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC16.87■□□□□ 0.29
BRCA2P51587 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC16.87■□□□□ 0.29
BRCA2P51587 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
BRCA2P51587 MRPL37P1-201ENST00000592451 1337 ntBASIC16.87■□□□□ 0.29
BRCA2P51587 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms