Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 RPS15-208ENST00000591804 711 ntTSL 5 BASIC16.34■□□□□ 0.21
LHX1P48742 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
LHX1P48742 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
LHX1P48742 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC16.34■□□□□ 0.21
LHX1P48742 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
LHX1P48742 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
LHX1P48742 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LHX1P48742 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
LHX1P48742 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC16.34■□□□□ 0.21
LHX1P48742 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LHX1P48742 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LHX1P48742 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC16.34■□□□□ 0.21
LHX1P48742 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LHX1P48742 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
LHX1P48742 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LHX1P48742 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC16.34■□□□□ 0.21
LHX1P48742 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC16.34■□□□□ 0.21
LHX1P48742 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
LHX1P48742 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC16.34■□□□□ 0.21
LHX1P48742 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC16.34■□□□□ 0.21
LHX1P48742 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC16.34■□□□□ 0.21
LHX1P48742 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
LHX1P48742 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
LHX1P48742 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
LHX1P48742 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
LHX1P48742 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC16.33■□□□□ 0.21
LHX1P48742 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
LHX1P48742 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC16.33■□□□□ 0.21
LHX1P48742 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
LHX1P48742 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
LHX1P48742 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
LHX1P48742 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC16.33■□□□□ 0.21
LHX1P48742 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
LHX1P48742 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
LHX1P48742 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LHX1P48742 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LHX1P48742 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
LHX1P48742 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
LHX1P48742 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC16.33■□□□□ 0.2
LHX1P48742 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
LHX1P48742 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC16.33■□□□□ 0.2
LHX1P48742 MIR1909-201ENST00000411312 80 ntBASIC16.33■□□□□ 0.2
LHX1P48742 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LHX1P48742 C2orf27AP3-201ENST00000434123 579 ntBASIC16.33■□□□□ 0.2
LHX1P48742 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
LHX1P48742 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
LHX1P48742 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC16.33■□□□□ 0.2
LHX1P48742 AC022210.1-201ENST00000449856 793 ntBASIC16.33■□□□□ 0.2
LHX1P48742 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
LHX1P48742 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC16.33■□□□□ 0.2
LHX1P48742 AC007551.1-201ENST00000457394 519 ntBASIC16.33■□□□□ 0.2
LHX1P48742 AC106760.1-201ENST00000508690 800 ntBASIC16.33■□□□□ 0.2
LHX1P48742 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LHX1P48742 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC16.33■□□□□ 0.2
LHX1P48742 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC16.33■□□□□ 0.2
LHX1P48742 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC16.33■□□□□ 0.2
LHX1P48742 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
LHX1P48742 AP005482.1-201ENST00000563722 1273 ntBASIC16.33■□□□□ 0.2
LHX1P48742 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC16.33■□□□□ 0.2
LHX1P48742 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC16.33■□□□□ 0.2
LHX1P48742 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC16.33■□□□□ 0.2
LHX1P48742 AL354718.3-201ENST00000616414 581 ntBASIC16.33■□□□□ 0.2
LHX1P48742 CR382287.1-201ENST00000623954 586 ntBASIC16.33■□□□□ 0.2
LHX1P48742 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC16.33■□□□□ 0.2
LHX1P48742 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
LHX1P48742 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LHX1P48742 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC16.33■□□□□ 0.2
LHX1P48742 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LHX1P48742 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
LHX1P48742 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LHX1P48742 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LHX1P48742 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LHX1P48742 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC16.33■□□□□ 0.2
LHX1P48742 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LHX1P48742 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC16.33■□□□□ 0.2
LHX1P48742 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LHX1P48742 AGK-211ENST00000629555 2765 ntTSL 5 BASIC16.32■□□□□ 0.2
LHX1P48742 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
LHX1P48742 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
LHX1P48742 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LHX1P48742 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
LHX1P48742 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
LHX1P48742 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
LHX1P48742 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LHX1P48742 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
LHX1P48742 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LHX1P48742 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LHX1P48742 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC16.32■□□□□ 0.2
LHX1P48742 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC16.32■□□□□ 0.2
LHX1P48742 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC16.32■□□□□ 0.2
LHX1P48742 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
LHX1P48742 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
LHX1P48742 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC16.32■□□□□ 0.2
LHX1P48742 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
LHX1P48742 FTH1P14-201ENST00000482930 551 ntBASIC16.32■□□□□ 0.2
LHX1P48742 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC16.32■□□□□ 0.2
LHX1P48742 AC104989.1-201ENST00000519711 778 ntBASIC16.32■□□□□ 0.2
LHX1P48742 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC16.32■□□□□ 0.2
LHX1P48742 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC16.32■□□□□ 0.2
LHX1P48742 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms