Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HOXC8P31273 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HOXC8P31273 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC16.62■□□□□ 0.25
HOXC8P31273 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC16.62■□□□□ 0.25
HOXC8P31273 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC16.62■□□□□ 0.25
HOXC8P31273 RPS15-202ENST00000585665 467 ntTSL 3 BASIC16.62■□□□□ 0.25
HOXC8P31273 KLK3-207ENST00000595952 969 ntTSL 3 BASIC16.62■□□□□ 0.25
HOXC8P31273 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC16.62■□□□□ 0.25
HOXC8P31273 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC16.62■□□□□ 0.25
HOXC8P31273 AP001505.2-201ENST00000616815 443 ntBASIC16.62■□□□□ 0.25
HOXC8P31273 AC002472.3-201ENST00000640124 621 ntBASIC16.62■□□□□ 0.25
HOXC8P31273 AC068587.8-201ENST00000641239 219 ntBASIC16.62■□□□□ 0.25
HOXC8P31273 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC16.62■□□□□ 0.25
HOXC8P31273 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HOXC8P31273 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
HOXC8P31273 LTB4R2-202ENST00000528054 3092 ntBASIC16.62■□□□□ 0.25
HOXC8P31273 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HOXC8P31273 AP003680.1-201ENST00000598970 3660 ntBASIC16.62■□□□□ 0.25
HOXC8P31273 AL138725.1-201ENST00000407347 1314 ntBASIC16.62■□□□□ 0.25
HOXC8P31273 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
HOXC8P31273 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HOXC8P31273 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HOXC8P31273 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
HOXC8P31273 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HOXC8P31273 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
HOXC8P31273 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
HOXC8P31273 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
HOXC8P31273 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HOXC8P31273 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HOXC8P31273 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HOXC8P31273 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
HOXC8P31273 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HOXC8P31273 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HOXC8P31273 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
HOXC8P31273 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC16.61■□□□□ 0.25
HOXC8P31273 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC16.61■□□□□ 0.25
HOXC8P31273 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC16.61■□□□□ 0.25
HOXC8P31273 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HOXC8P31273 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HOXC8P31273 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC16.61■□□□□ 0.25
HOXC8P31273 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC16.61■□□□□ 0.25
HOXC8P31273 HLA-DPB2-205ENST00000435074 1188 ntBASIC16.61■□□□□ 0.25
HOXC8P31273 AC005740.2-201ENST00000511085 419 ntBASIC16.61■□□□□ 0.25
HOXC8P31273 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
HOXC8P31273 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC16.61■□□□□ 0.25
HOXC8P31273 FOS-206ENST00000555347 1280 ntTSL 2 BASIC16.61■□□□□ 0.25
HOXC8P31273 COG4-212ENST00000564653 590 ntTSL 5 BASIC16.61■□□□□ 0.25
HOXC8P31273 AC016629.1-201ENST00000596579 586 ntBASIC16.61■□□□□ 0.25
HOXC8P31273 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
HOXC8P31273 AL136301.1-201ENST00000615830 422 ntBASIC16.61■□□□□ 0.25
HOXC8P31273 AC100757.4-201ENST00000626934 759 ntBASIC16.61■□□□□ 0.25
HOXC8P31273 AC004923.1-202ENST00000642106 209 ntBASIC16.61■□□□□ 0.25
HOXC8P31273 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HOXC8P31273 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC16.61■□□□□ 0.25
HOXC8P31273 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HOXC8P31273 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
HOXC8P31273 SHC1P1-201ENST00000425230 1745 ntBASIC16.61■□□□□ 0.25
HOXC8P31273 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
HOXC8P31273 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
HOXC8P31273 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HOXC8P31273 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
HOXC8P31273 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
HOXC8P31273 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC16.61■□□□□ 0.25
HOXC8P31273 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
HOXC8P31273 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
HOXC8P31273 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
HOXC8P31273 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HOXC8P31273 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HOXC8P31273 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HOXC8P31273 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HOXC8P31273 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC16.61■□□□□ 0.25
HOXC8P31273 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
HOXC8P31273 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC16.6■□□□□ 0.25
HOXC8P31273 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HOXC8P31273 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HOXC8P31273 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HOXC8P31273 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
HOXC8P31273 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HOXC8P31273 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC16.6■□□□□ 0.25
HOXC8P31273 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
HOXC8P31273 AC004899.1-201ENST00000424687 1714 ntBASIC16.6■□□□□ 0.25
HOXC8P31273 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC16.6■□□□□ 0.25
HOXC8P31273 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC16.6■□□□□ 0.25
HOXC8P31273 RBM38-204ENST00000371219 760 ntTSL 2 BASIC16.6■□□□□ 0.25
HOXC8P31273 MIR769-201ENST00000390225 118 ntBASIC16.6■□□□□ 0.25
HOXC8P31273 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC16.6■□□□□ 0.25
HOXC8P31273 RNMTL1P1-201ENST00000454103 560 ntBASIC16.6■□□□□ 0.25
HOXC8P31273 OARD1-204ENST00000464633 717 ntTSL 2 BASIC16.6■□□□□ 0.25
HOXC8P31273 IMP3P2-201ENST00000489760 475 ntBASIC16.6■□□□□ 0.25
HOXC8P31273 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HOXC8P31273 MARK2P5-201ENST00000507649 634 ntBASIC16.6■□□□□ 0.25
HOXC8P31273 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC16.6■□□□□ 0.25
HOXC8P31273 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC16.6■□□□□ 0.25
HOXC8P31273 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC16.6■□□□□ 0.25
HOXC8P31273 AC079328.1-201ENST00000560358 952 ntBASIC16.6■□□□□ 0.25
HOXC8P31273 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC16.6■□□□□ 0.25
HOXC8P31273 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HOXC8P31273 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC16.6■□□□□ 0.25
HOXC8P31273 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC16.6■□□□□ 0.25
HOXC8P31273 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 64.9 ms