Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TM4SF1P30408 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
TM4SF1P30408 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TM4SF1P30408 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TM4SF1P30408 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
TM4SF1P30408 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TM4SF1P30408 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TM4SF1P30408 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TM4SF1P30408 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC18.89■□□□□ 0.61
TM4SF1P30408 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
TM4SF1P30408 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC18.89■□□□□ 0.61
TM4SF1P30408 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC18.89■□□□□ 0.61
TM4SF1P30408 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC18.89■□□□□ 0.61
TM4SF1P30408 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TM4SF1P30408 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC18.89■□□□□ 0.61
TM4SF1P30408 MIR6842-201ENST00000612539 65 ntBASIC18.89■□□□□ 0.61
TM4SF1P30408 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC18.89■□□□□ 0.61
TM4SF1P30408 AL805961.1-201ENST00000642026 753 ntBASIC18.89■□□□□ 0.61
TM4SF1P30408 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC18.89■□□□□ 0.61
TM4SF1P30408 AL157414.3-201ENST00000624276 1954 ntBASIC18.89■□□□□ 0.61
TM4SF1P30408 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
TM4SF1P30408 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.61
TM4SF1P30408 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TM4SF1P30408 TBC1D3J-201ENST00000620719 1426 ntBASIC18.89■□□□□ 0.61
TM4SF1P30408 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
TM4SF1P30408 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
TM4SF1P30408 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC18.89■□□□□ 0.61
TM4SF1P30408 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
TM4SF1P30408 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC18.89■□□□□ 0.61
TM4SF1P30408 AMT-204ENST00000427987 1646 ntTSL 5 BASIC18.89■□□□□ 0.61
TM4SF1P30408 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TM4SF1P30408 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC18.88■□□□□ 0.61
TM4SF1P30408 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
TM4SF1P30408 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TM4SF1P30408 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TM4SF1P30408 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TM4SF1P30408 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC18.88■□□□□ 0.61
TM4SF1P30408 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
TM4SF1P30408 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TM4SF1P30408 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TM4SF1P30408 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TM4SF1P30408 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TM4SF1P30408 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TM4SF1P30408 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TM4SF1P30408 RNASE10-201ENST00000328444 717 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
TM4SF1P30408 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TM4SF1P30408 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TM4SF1P30408 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
TM4SF1P30408 AL627231.1-201ENST00000394467 1125 ntBASIC18.88■□□□□ 0.61
TM4SF1P30408 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
TM4SF1P30408 RPL5P21-201ENST00000404620 815 ntBASIC18.88■□□□□ 0.61
TM4SF1P30408 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC18.88■□□□□ 0.61
TM4SF1P30408 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TM4SF1P30408 AC078991.1-201ENST00000437297 610 ntBASIC18.88■□□□□ 0.61
TM4SF1P30408 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC18.88■□□□□ 0.61
TM4SF1P30408 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC18.88■□□□□ 0.61
TM4SF1P30408 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC18.88■□□□□ 0.61
TM4SF1P30408 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC18.88■□□□□ 0.61
TM4SF1P30408 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
TM4SF1P30408 AC090857.1-201ENST00000527400 390 ntBASIC18.88■□□□□ 0.61
TM4SF1P30408 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
TM4SF1P30408 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC18.88■□□□□ 0.61
TM4SF1P30408 NAT9-211ENST00000580632 799 ntTSL 3 BASIC18.88■□□□□ 0.61
TM4SF1P30408 IRF3-215ENST00000596822 823 ntTSL 3 BASIC18.88■□□□□ 0.61
TM4SF1P30408 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC18.88■□□□□ 0.61
TM4SF1P30408 YRDCP1-201ENST00000621419 643 ntBASIC18.88■□□□□ 0.61
TM4SF1P30408 TNRC18P3-201ENST00000441896 2691 ntBASIC18.88■□□□□ 0.61
TM4SF1P30408 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC18.88■□□□□ 0.61
TM4SF1P30408 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TM4SF1P30408 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC18.88■□□□□ 0.61
TM4SF1P30408 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC18.88■□□□□ 0.61
TM4SF1P30408 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC18.88■□□□□ 0.61
TM4SF1P30408 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
TM4SF1P30408 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TM4SF1P30408 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC18.88■□□□□ 0.61
TM4SF1P30408 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC18.88■□□□□ 0.61
TM4SF1P30408 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC18.88■□□□□ 0.61
TM4SF1P30408 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
TM4SF1P30408 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TM4SF1P30408 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC18.88■□□□□ 0.61
TM4SF1P30408 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC18.88■□□□□ 0.61
TM4SF1P30408 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
TM4SF1P30408 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.87■□□□□ 0.61
TM4SF1P30408 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TM4SF1P30408 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TM4SF1P30408 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TM4SF1P30408 RBM38-204ENST00000371219 760 ntTSL 2 BASIC18.87■□□□□ 0.61
TM4SF1P30408 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC18.87■□□□□ 0.61
TM4SF1P30408 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
TM4SF1P30408 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TM4SF1P30408 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TM4SF1P30408 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
TM4SF1P30408 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC18.87■□□□□ 0.61
TM4SF1P30408 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC18.87■□□□□ 0.61
TM4SF1P30408 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
TM4SF1P30408 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC18.87■□□□□ 0.61
TM4SF1P30408 RPL13AP19-201ENST00000434320 584 ntBASIC18.87■□□□□ 0.61
TM4SF1P30408 AC244394.1-201ENST00000435000 1665 ntBASIC18.87■□□□□ 0.61
TM4SF1P30408 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
TM4SF1P30408 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 10.7 ms