Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
PTPN6P29350 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
PTPN6P29350 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
PTPN6P29350 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PTPN6P29350 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC14.75□□□□□ -0.05
PTPN6P29350 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC14.75□□□□□ -0.05
PTPN6P29350 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
PTPN6P29350 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
PTPN6P29350 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PTPN6P29350 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
PTPN6P29350 WASH3P-207ENST00000560956 1394 ntBASIC14.74□□□□□ -0.05
PTPN6P29350 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC14.74□□□□□ -0.05
PTPN6P29350 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC14.74□□□□□ -0.05
PTPN6P29350 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC14.74□□□□□ -0.05
PTPN6P29350 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PTPN6P29350 AC005912.2-201ENST00000619492 2400 ntBASIC14.74□□□□□ -0.05
PTPN6P29350 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PTPN6P29350 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PTPN6P29350 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC14.74□□□□□ -0.05
PTPN6P29350 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PTPN6P29350 AL365209.1-201ENST00000624418 6473 ntBASIC14.74□□□□□ -0.05
PTPN6P29350 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
PTPN6P29350 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
PTPN6P29350 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
PTPN6P29350 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
PTPN6P29350 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC14.74□□□□□ -0.05
PTPN6P29350 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PTPN6P29350 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC14.74□□□□□ -0.05
PTPN6P29350 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
PTPN6P29350 CENPM-205ENST00000404067 905 ntTSL 3 BASIC14.74□□□□□ -0.05
PTPN6P29350 GHSR-202ENST00000427970 912 ntBASIC14.74□□□□□ -0.05
PTPN6P29350 AC092580.3-201ENST00000430932 139 ntBASIC14.74□□□□□ -0.05
PTPN6P29350 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC14.74□□□□□ -0.05
PTPN6P29350 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PTPN6P29350 PTK7-212ENST00000476760 902 ntTSL 2 BASIC14.74□□□□□ -0.05
PTPN6P29350 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC14.74□□□□□ -0.05
PTPN6P29350 IGHV3-42-201ENST00000520410 361 ntBASIC14.74□□□□□ -0.05
PTPN6P29350 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC14.74□□□□□ -0.05
PTPN6P29350 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC14.74□□□□□ -0.05
PTPN6P29350 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC14.74□□□□□ -0.05
PTPN6P29350 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC14.74□□□□□ -0.05
PTPN6P29350 SPDYE12P-201ENST00000618416 771 ntBASIC14.74□□□□□ -0.05
PTPN6P29350 GPER1-207ENST00000619052 571 ntTSL 2 BASIC14.74□□□□□ -0.05
PTPN6P29350 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
PTPN6P29350 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC14.74□□□□□ -0.05
PTPN6P29350 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC14.74□□□□□ -0.05
PTPN6P29350 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PTPN6P29350 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
PTPN6P29350 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC14.74□□□□□ -0.05
PTPN6P29350 AC005089.1-201ENST00000619486 2241 ntBASIC14.74□□□□□ -0.05
PTPN6P29350 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC14.74□□□□□ -0.05
PTPN6P29350 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PTPN6P29350 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
PTPN6P29350 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PTPN6P29350 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC14.74□□□□□ -0.05
PTPN6P29350 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC14.74□□□□□ -0.05
PTPN6P29350 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
PTPN6P29350 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC14.74□□□□□ -0.05
PTPN6P29350 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
PTPN6P29350 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
PTPN6P29350 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
PTPN6P29350 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
PTPN6P29350 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PTPN6P29350 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PTPN6P29350 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
PTPN6P29350 CICP14-201ENST00000629111 2732 ntBASIC14.73□□□□□ -0.05
PTPN6P29350 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PTPN6P29350 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
PTPN6P29350 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PTPN6P29350 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
PTPN6P29350 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC14.73□□□□□ -0.05
PTPN6P29350 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
PTPN6P29350 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
PTPN6P29350 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PTPN6P29350 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PTPN6P29350 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PTPN6P29350 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC14.73□□□□□ -0.05
PTPN6P29350 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PTPN6P29350 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
PTPN6P29350 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
PTPN6P29350 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PTPN6P29350 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PTPN6P29350 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PTPN6P29350 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PTPN6P29350 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC14.73□□□□□ -0.05
PTPN6P29350 MTND6P24-201ENST00000440466 518 ntBASIC14.73□□□□□ -0.05
PTPN6P29350 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC14.73□□□□□ -0.05
PTPN6P29350 HLA-V-204ENST00000476601 1289 ntBASIC14.73□□□□□ -0.05
PTPN6P29350 AC093214.1-201ENST00000511688 1107 ntBASIC14.73□□□□□ -0.05
PTPN6P29350 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC14.73□□□□□ -0.05
PTPN6P29350 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC14.73□□□□□ -0.05
PTPN6P29350 AP000845.1-201ENST00000581677 2131 ntBASIC14.73□□□□□ -0.05
PTPN6P29350 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
PTPN6P29350 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC14.73□□□□□ -0.05
PTPN6P29350 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PTPN6P29350 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PTPN6P29350 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PTPN6P29350 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PTPN6P29350 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC14.73□□□□□ -0.05
PTPN6P29350 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms