Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TNFSF4P23510 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
TNFSF4P23510 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TNFSF4P23510 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TNFSF4P23510 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
TNFSF4P23510 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TNFSF4P23510 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TNFSF4P23510 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC13.33□□□□□ -0.28
TNFSF4P23510 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC13.33□□□□□ -0.28
TNFSF4P23510 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TNFSF4P23510 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TNFSF4P23510 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC13.33□□□□□ -0.28
TNFSF4P23510 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TNFSF4P23510 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TNFSF4P23510 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC13.32□□□□□ -0.28
TNFSF4P23510 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TNFSF4P23510 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
TNFSF4P23510 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC13.32□□□□□ -0.28
TNFSF4P23510 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC13.32□□□□□ -0.28
TNFSF4P23510 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TNFSF4P23510 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC13.32□□□□□ -0.28
TNFSF4P23510 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
TNFSF4P23510 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TNFSF4P23510 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC13.32□□□□□ -0.28
TNFSF4P23510 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TNFSF4P23510 TKT-202ENST00000423516 2075 ntTSL 2 BASIC13.32□□□□□ -0.28
TNFSF4P23510 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TNFSF4P23510 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TNFSF4P23510 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TNFSF4P23510 TK1-203ENST00000588734 1681 ntTSL 2 BASIC13.32□□□□□ -0.28
TNFSF4P23510 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TNFSF4P23510 LINC02199-201ENST00000506655 2702 ntBASIC13.32□□□□□ -0.28
TNFSF4P23510 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
TNFSF4P23510 CYP2AB1P-202ENST00000454440 1456 ntBASIC13.32□□□□□ -0.28
TNFSF4P23510 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TNFSF4P23510 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC13.32□□□□□ -0.28
TNFSF4P23510 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
TNFSF4P23510 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TNFSF4P23510 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC13.32□□□□□ -0.28
TNFSF4P23510 AC074338.1-201ENST00000416825 156 ntBASIC13.32□□□□□ -0.28
TNFSF4P23510 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TNFSF4P23510 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC13.32□□□□□ -0.28
TNFSF4P23510 TMPRSS11CP-201ENST00000453277 683 ntBASIC13.32□□□□□ -0.28
TNFSF4P23510 CDK4-206ENST00000549606 558 ntTSL 2 BASIC13.32□□□□□ -0.28
TNFSF4P23510 AC190387.1-201ENST00000551683 408 ntBASIC13.32□□□□□ -0.28
TNFSF4P23510 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC13.32□□□□□ -0.28
TNFSF4P23510 ARL16-202ENST00000570561 768 ntTSL 2 BASIC13.32□□□□□ -0.28
TNFSF4P23510 AC099568.2-201ENST00000609194 695 ntBASIC13.32□□□□□ -0.28
TNFSF4P23510 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
TNFSF4P23510 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
TNFSF4P23510 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TNFSF4P23510 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TNFSF4P23510 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TNFSF4P23510 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TNFSF4P23510 SLC7A15P-201ENST00000424028 1363 ntBASIC13.32□□□□□ -0.28
TNFSF4P23510 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TNFSF4P23510 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TNFSF4P23510 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC13.31□□□□□ -0.28
TNFSF4P23510 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TNFSF4P23510 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TNFSF4P23510 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TNFSF4P23510 DKFZP434H168-201ENST00000567381 1905 ntBASIC13.31□□□□□ -0.28
TNFSF4P23510 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
TNFSF4P23510 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
TNFSF4P23510 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
TNFSF4P23510 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TNFSF4P23510 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
TNFSF4P23510 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC13.31□□□□□ -0.28
TNFSF4P23510 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
TNFSF4P23510 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TNFSF4P23510 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TNFSF4P23510 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
TNFSF4P23510 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TNFSF4P23510 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC13.31□□□□□ -0.28
TNFSF4P23510 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC13.31□□□□□ -0.28
TNFSF4P23510 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC13.31□□□□□ -0.28
TNFSF4P23510 RHOA-206ENST00000454011 889 ntTSL 2 BASIC13.31□□□□□ -0.28
TNFSF4P23510 AC023310.3-201ENST00000557027 670 ntBASIC13.31□□□□□ -0.28
TNFSF4P23510 AC100756.1-201ENST00000562736 682 ntBASIC13.31□□□□□ -0.28
TNFSF4P23510 AC138749.3-201ENST00000567691 622 ntBASIC13.31□□□□□ -0.28
TNFSF4P23510 AC140912.1-201ENST00000577171 1054 ntBASIC13.31□□□□□ -0.28
TNFSF4P23510 AC093726.1-201ENST00000608064 963 ntBASIC13.31□□□□□ -0.28
TNFSF4P23510 AC116165.1-201ENST00000611806 668 ntBASIC13.31□□□□□ -0.28
TNFSF4P23510 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
TNFSF4P23510 AL358472.5-202ENST00000641448 1267 ntBASIC13.31□□□□□ -0.28
TNFSF4P23510 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC13.31□□□□□ -0.28
TNFSF4P23510 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
TNFSF4P23510 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TNFSF4P23510 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC13.31□□□□□ -0.28
TNFSF4P23510 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
TNFSF4P23510 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC13.31□□□□□ -0.28
TNFSF4P23510 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TNFSF4P23510 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
TNFSF4P23510 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
TNFSF4P23510 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TNFSF4P23510 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC13.31□□□□□ -0.28
TNFSF4P23510 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
TNFSF4P23510 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC13.31□□□□□ -0.28
TNFSF4P23510 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TNFSF4P23510 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms