Protein–RNA interactions for Protein: P23396

RPS3, 40S ribosomal protein S3, humanhuman

Known RBP eCLIP

Length 243 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3P23396 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC23.01■■□□□ 1.271e-10■□□□□ 10.3
RPS3P23396 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.071e-10■□□□□ 10.3
RPS3P23396 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC14.98□□□□□ -0.011e-10■□□□□ 10.3
RPS3P23396 CNN3-203ENST00000415017 792 ntTSL 213.17□□□□□ -0.31e-10■□□□□ 10.3
RPS3P23396 C1RL-204ENST00000534969 532 ntTSL 311.15□□□□□ -0.621e-10■□□□□ 10.3
RPS3P23396 C1RL-205ENST00000537833 561 ntTSL 311.15□□□□□ -0.621e-10■□□□□ 10.3
RPS3P23396 PAH-215ENST00000553106 4122 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.841e-10■□□□□ 10.3
RPS3P23396 PAH-201ENST00000307000 2466 ntTSL 5 BASIC7.38□□□□□ -1.231e-10■□□□□ 10.3
RPS3P23396 PAH-208ENST00000549247 961 ntTSL 26.07□□□□□ -1.441e-10■□□□□ 10.3
RPS3P23396 PAH-211ENST00000551114 1109 ntTSL 24.32□□□□□ -1.721e-10■□□□□ 10.3
RPS3P23396 PAH-216ENST00000635477 429 ntTSL 54.32□□□□□ -1.721e-10■□□□□ 10.3
RPS3P23396 CNN3-204ENST00000461018 568 ntTSL 24.07□□□□□ -1.761e-10■□□□□ 10.3
RPS3P23396 CNN3-206ENST00000487539 739 ntTSL 23.63□□□□□ -1.831e-10■□□□□ 10.3
RPS3P23396 PAH-218ENST00000635528 960 ntTSL 33.49□□□□□ -1.851e-10■□□□□ 10.3
RPS3P23396 SREBF2-208ENST00000491541 4043 ntTSL 1 (best)10.09□□□□□ -0.792e-13■□□□□ 10.3
RPS3P23396 LONP1-204ENST00000586617 471 ntTSL 524.81■■□□□ 1.566e-8■□□□□ 10.3
RPS3P23396 LONP1-210ENST00000590511 722 ntTSL 323.77■■□□□ 1.46e-8■□□□□ 10.3
RPS3P23396 LONP1-212ENST00000590728 591 ntTSL 423.44■■□□□ 1.346e-8■□□□□ 10.3
RPS3P23396 LONP1-205ENST00000587365 641 ntTSL 523.17■■□□□ 1.36e-8■□□□□ 10.3
RPS3P23396 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.746e-8■□□□□ 10.3
RPS3P23396 SGSH-205ENST00000571075 578 ntTSL 219.41■□□□□ 0.76e-8■□□□□ 10.3
RPS3P23396 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.456e-8■□□□□ 10.3
RPS3P23396 PPM1G-203ENST00000484925 836 ntTSL 217.44■□□□□ 0.386e-8■□□□□ 10.3
RPS3P23396 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.376e-8■□□□□ 10.3
RPS3P23396 NCLN-207ENST00000592235 380 ntTSL 516.32■□□□□ 0.26e-8■□□□□ 10.3
RPS3P23396 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.26e-8■□□□□ 10.3
RPS3P23396 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.26e-8■□□□□ 10.3
RPS3P23396 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.156e-8■□□□□ 10.3
RPS3P23396 TJP2-211ENST00000636247 3725 ntTSL 1 (best)12.48□□□□□ -0.416e-8■□□□□ 10.3
RPS3P23396 NARS2-207ENST00000529880 755 ntTSL 311.94□□□□□ -0.56e-8■□□□□ 10.3
RPS3P23396 TJP2-201ENST00000348208 4058 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.56e-8■□□□□ 10.3
RPS3P23396 TJP2-209ENST00000539225 3838 ntAPPRIS ALT2 TSL 2 BASIC11.93□□□□□ -0.56e-8■□□□□ 10.3
RPS3P23396 PPM1G-202ENST00000472077 3752 ntTSL 29.02□□□□□ -0.976e-8■□□□□ 10.3
RPS3P23396 SARAF-211ENST00000522794 808 ntTSL 57.64□□□□□ -1.193e-9■□□□□ 10.3
RPS3P23396 RN7SKP160-201ENST00000363804 340 ntBASIC5.19□□□□□ -1.584e-15■□□□□ 10.3
RPS3P23396 ERO1A-209ENST00000556769 934 ntTSL 52.76□□□□□ -1.976e-8■□□□□ 10.3
RPS3P23396 NARS2-205ENST00000529571 594 ntTSL 51.65□□□□□ -2.156e-8■□□□□ 10.3
RPS3P23396 EEF2-201ENST00000309311 3164 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.593e-18■□□□□ 10.3
RPS3P23396 MPP1-217ENST00000493871 585 ntTSL 27.91□□□□□ -1.145e-15■□□□□ 10.3
RPS3P23396 SLC39A5-208ENST00000447080 380 ntTSL 519.76■□□□□ 0.759e-7■□□□□ 10.2
RPS3P23396 SLC39A5-203ENST00000419232 833 ntTSL 318.99■□□□□ 0.639e-7■□□□□ 10.2
RPS3P23396 STC2-203ENST00000519511 582 ntTSL 215.42■□□□□ 0.062e-10■□□□□ 10.2
RPS3P23396 LSR-210ENST00000602003 297 ntTSL 417.75■□□□□ 0.431e-13■□□□□ 10.2
RPS3P23396 PSME2-206ENST00000559042 643 nt13.61□□□□□ -0.234e-11■□□□□ 10.2
RPS3P23396 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC16.56■□□□□ 0.242e-10■□□□□ 10.2
RPS3P23396 CDK2-206ENST00000554619 1802 ntTSL 516.24■□□□□ 0.192e-10■□□□□ 10.2
RPS3P23396 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC14.63□□□□□ -0.072e-10■□□□□ 10.2
RPS3P23396 CDK2-201ENST00000266970 2296 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.272e-10■□□□□ 10.2
RPS3P23396 CDK2-208ENST00000555408 2598 ntTSL 312.74□□□□□ -0.372e-10■□□□□ 10.2
RPS3P23396 CDK2-207ENST00000555357 1367 ntTSL 512.64□□□□□ -0.392e-10■□□□□ 10.2
RPS3P23396 CDK2-203ENST00000440311 1031 ntTSL 2 BASIC12.1□□□□□ -0.472e-10■□□□□ 10.2
RPS3P23396 CDK2-211ENST00000556464 609 ntTSL 311.45□□□□□ -0.582e-10■□□□□ 10.2
RPS3P23396 MYL12A-204ENST00000578038 463 ntTSL 34.66□□□□□ -1.661e-9■□□□□ 10.2
RPS3P23396 DDIT3-203ENST00000547526 644 ntTSL 311.9□□□□□ -0.53e-12■□□□□ 10.2
RPS3P23396 DDIT3-201ENST00000346473 906 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.643e-12■□□□□ 10.2
RPS3P23396 DDIT3-202ENST00000547303 872 ntAPPRIS P1 TSL 2 BASIC10.56□□□□□ -0.723e-12■□□□□ 10.2
RPS3P23396 DDIT3-205ENST00000552740 951 ntTSL 1 (best) BASIC8.19□□□□□ -1.13e-12■□□□□ 10.2
RPS3P23396 DDIT3-204ENST00000551116 1067 ntTSL 1 (best) BASIC6.61□□□□□ -1.353e-12■□□□□ 10.2
RPS3P23396 DDIT3-206ENST00000623876 1151 nt6.41□□□□□ -1.383e-12■□□□□ 10.2
RPS3P23396 LAMA5-210ENST00000491036 728 ntTSL 215.48■□□□□ 0.072e-6■□□□□ 10.2
RPS3P23396 IST1-219ENST00000541571 1962 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.433e-8■□□□□ 10.2
RPS3P23396 IST1-221ENST00000544564 1500 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.433e-8■□□□□ 10.2
RPS3P23396 IST1-203ENST00000378799 4843 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.443e-8■□□□□ 10.2
RPS3P23396 IST1-205ENST00000439924 1841 ntTSL 511.63□□□□□ -0.553e-8■□□□□ 10.2
RPS3P23396 IST1-201ENST00000329908 2356 ntTSL 1 (best) BASIC11.02□□□□□ -0.653e-8■□□□□ 10.2
RPS3P23396 IST1-215ENST00000538850 1125 ntTSL 3 BASIC10.78□□□□□ -0.683e-8■□□□□ 10.2
RPS3P23396 IST1-206ENST00000456820 2031 ntTSL 510.78□□□□□ -0.683e-8■□□□□ 10.2
RPS3P23396 IST1-213ENST00000538565 1245 ntTSL 210.5□□□□□ -0.733e-8■□□□□ 10.2
RPS3P23396 IST1-202ENST00000378798 2255 ntTSL 1 (best) BASIC10.4□□□□□ -0.743e-8■□□□□ 10.2
RPS3P23396 IST1-226ENST00000606369 3583 ntTSL 2 BASIC8.66□□□□□ -1.023e-8■□□□□ 10.2
RPS3P23396 IST1-208ENST00000535424 4082 ntTSL 5 BASIC8.19□□□□□ -1.13e-8■□□□□ 10.2
RPS3P23396 YWHAQ-204ENST00000460093 345 ntTSL 24.64□□□□□ -1.673e-11■□□□□ 10.2
RPS3P23396 SARAF-203ENST00000518174 1981 ntTSL 518.74■□□□□ 0.594e-8■□□□□ 10.2
RPS3P23396 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC18.3■□□□□ 0.524e-8■□□□□ 10.2
RPS3P23396 SARAF-206ENST00000520303 1803 ntTSL 1 (best)17.83■□□□□ 0.444e-8■□□□□ 10.2
RPS3P23396 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.194e-8■□□□□ 10.2
RPS3P23396 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC27.72■■■□□ 2.036e-12■□□□□ 10.2
RPS3P23396 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC25.12■■□□□ 1.616e-12■□□□□ 10.2
RPS3P23396 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.326e-12■□□□□ 10.2
RPS3P23396 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.016e-12■□□□□ 10.2
RPS3P23396 MPST-204ENST00000404393 1329 ntTSL 5 BASIC21.12■□□□□ 0.976e-12■□□□□ 10.2
RPS3P23396 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC20.92■□□□□ 0.946e-12■□□□□ 10.2
RPS3P23396 MPST-207ENST00000485587 5872 ntTSL 216.36■□□□□ 0.216e-12■□□□□ 10.2
RPS3P23396 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC14.36□□□□□ -0.116e-12■□□□□ 10.2
RPS3P23396 GTF3C2-204ENST00000423998 828 ntTSL 513.55□□□□□ -0.246e-12■□□□□ 10.2
RPS3P23396 GTF3C2-208ENST00000457748 557 ntTSL 512.29□□□□□ -0.446e-12■□□□□ 10.2
RPS3P23396 GTF3C2-201ENST00000264720 3882 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.766e-12■□□□□ 10.2
RPS3P23396 GTF3C2-202ENST00000359541 3992 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.946e-12■□□□□ 10.2
RPS3P23396 KARS-211ENST00000569298 589 ntTSL 26.26□□□□□ -1.416e-12■□□□□ 10.2
RPS3P23396 IPO4-220ENST00000561462 1864 ntTSL 216.24■□□□□ 0.195e-7■□□□□ 10.2
RPS3P23396 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.372e-12■□□□□ 10.2
RPS3P23396 RPS12-202ENST00000484616 639 ntTSL 22.81□□□□□ -1.962e-12■□□□□ 10.2
RPS3P23396 ERGIC3-212ENST00000465298 505 ntTSL 212.99□□□□□ -0.331e-12■□□□□ 10.2
RPS3P23396 NCL-207ENST00000461347 3967 ntTSL 213.89□□□□□ -0.192e-23■□□□□ 10.2
RPS3P23396 NCL-201ENST00000322723 4034 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.52e-23■□□□□ 10.2
RPS3P23396 SEC61A1-206ENST00000491668 558 ntTSL 412.23□□□□□ -0.457e-11■□□□□ 10.2
RPS3P23396 SEPT9-227ENST00000590059 670 ntTSL 520.62■□□□□ 0.892e-7■□□□□ 10.2
RPS3P23396 SEPT9-219ENST00000588575 559 ntTSL 419.82■□□□□ 0.762e-7■□□□□ 10.2
RPS3P23396 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC14.7□□□□□ -0.062e-7■□□□□ 10.2
RPS3P23396 TCIRG1-215ENST00000533947 956 ntTSL 520.24■□□□□ 0.834e-12■□□□□ 10.2
Retrieved 100 of 24,271 protein–RNA pairs in 625.2 ms