RNA–Protein interactions for RNA: ENST00000569298.1

KARS-211, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 2

Gene KARS, Length 589 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-211ENST00000569298 AEBP2Q6ZN18 517 aaPredicted RBP20.12■□□□□ 0.81
KARS-211ENST00000569298 CHIC1Q5VXU3 224 aa19.34■□□□□ 0.69
KARS-211ENST00000569298 SENP3Q9H4L4 574 aaPredicted RBP17.13■□□□□ 0.33
KARS-211ENST00000569298 PHF23Q9BUL5 403 aaPredicted RBP16.96■□□□□ 0.31
KARS-211ENST00000569298 FOXD1Q16676 465 aa15.93■□□□□ 0.14
KARS-211ENST00000569298 PLPPR3Q6T4P5 718 aa15.56■□□□□ 0.08
KARS-211ENST00000569298 PPP6R1Q9UPN7 881 aa15.07■□□□□ 0
KARS-211ENST00000569298 ADRA2BP18089 450 aa15.01□□□□□ -0.01
KARS-211ENST00000569298 PIAS4Q8N2W9 510 aaPredicted RBP14.92□□□□□ -0.02
KARS-211ENST00000569298 MSH5O43196 834 aa14.84□□□□□ -0.03
KARS-211ENST00000569298 POTEDQ86YR6 584 aa14.08□□□□□ -0.16
KARS-211ENST00000569298 SCAF1Q9H7N4 1312 aaKnown RBP13.77□□□□□ -0.21
KARS-211ENST00000569298 MAPK8IP2Q13387 824 aaPredicted RBP13.73□□□□□ -0.21
KARS-211ENST00000569298 PPP4R3CPQ6ZMV5 832 aa13.65□□□□□ -0.22
KARS-211ENST00000569298 DMRT2Q9Y5R5 561 aa13.63□□□□□ -0.23
KARS-211ENST00000569298 CNKSR2Q8WXI2 1034 aa13.36□□□□□ -0.27
KARS-211ENST00000569298 HOXD11P31277 338 aaPredicted RBP13.23□□□□□ -0.29
KARS-211ENST00000569298 NCBP3Q53F19 620 aaKnown RBP13.2□□□□□ -0.3
KARS-211ENST00000569298 RNF216Q9NWF9 866 aaPredicted RBP13.19□□□□□ -0.3
KARS-211ENST00000569298 NPM3O75607 178 aaKnown RBP13□□□□□ -0.33
KARS-211ENST00000569298 DCAF8L1A6NGE4 600 aa12.99□□□□□ -0.33
KARS-211ENST00000569298 KCNA4P22459 653 aa12.94□□□□□ -0.34
KARS-211ENST00000569298 DNAJC5BQ9UF47 199 aa12.78□□□□□ -0.36
KARS-211ENST00000569298 RNF39Q9H2S5 420 aa12.68□□□□□ -0.38
KARS-211ENST00000569298 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.56□□□□□ -0.45e-6■□□□□ 8.1
KARS-211ENST00000569298 CACNB1Q02641 598 aaPredicted RBP12.55□□□□□ -0.4
KARS-211ENST00000569298 C1QBPQ07021 282 aaKnown RBP12.52□□□□□ -0.41
KARS-211ENST00000569298 SLC4A2P04920 1241 aa12.37□□□□□ -0.43
KARS-211ENST00000569298 U3KPZ7 1027 aaPredicted RBP12.35□□□□□ -0.43
KARS-211ENST00000569298 SLC4A1APQ9BWU0 796 aaKnown RBP12.26□□□□□ -0.45
KARS-211ENST00000569298 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.09□□□□□ -0.47
KARS-211ENST00000569298 HNRNPUL2Q1KMD3 747 aaKnown RBP12.09□□□□□ -0.47
KARS-211ENST00000569298 EHMT2Q96KQ7 1210 aa12.08□□□□□ -0.48
KARS-211ENST00000569298 SPINK5Q9NQ38 1064 aaPredicted RBP12.07□□□□□ -0.48
KARS-211ENST00000569298 CAPN15O75808 1086 aa12.03□□□□□ -0.48
KARS-211ENST00000569298 APLP2Q06481 763 aa12.03□□□□□ -0.48
KARS-211ENST00000569298 FOXD4L1Q9NU39 408 aa12.03□□□□□ -0.48
KARS-211ENST00000569298 MYCNP04198 464 aaPredicted RBP12.02□□□□□ -0.49
KARS-211ENST00000569298 SAMD1Q6SPF0 538 aaPredicted RBP12.02□□□□□ -0.49
KARS-211ENST00000569298 PELP1Q8IZL8 1130 aaKnown RBP11.96□□□□□ -0.49
KARS-211ENST00000569298 DSG3P32926 999 aa11.94□□□□□ -0.5
KARS-211ENST00000569298 MYT1Q01538 1121 aa11.94□□□□□ -0.5
KARS-211ENST00000569298 ZNF219Q9P2Y4 722 aaPredicted RBP11.92□□□□□ -0.5
KARS-211ENST00000569298 ZBTB22O15209 634 aa11.91□□□□□ -0.5
KARS-211ENST00000569298 TRHP20396 242 aaPredicted RBP11.89□□□□□ -0.51
KARS-211ENST00000569298 ABCB7O75027 752 aa11.77□□□□□ -0.53
KARS-211ENST00000569298 ATF5Q9Y2D1 282 aaPredicted RBP11.72□□□□□ -0.53
KARS-211ENST00000569298 ATXN8OSP0DMR3 200 aa11.67□□□□□ -0.54
KARS-211ENST00000569298 CSRNP3Q8WYN3 585 aa11.67□□□□□ -0.54
KARS-211ENST00000569298 POLA2Q14181 598 aa11.65□□□□□ -0.54
KARS-211ENST00000569298 TTBK1Q5TCY1 1321 aaPredicted RBP11.58□□□□□ -0.56
KARS-211ENST00000569298 ZBTB12Q9Y330 459 aaPredicted RBP11.45□□□□□ -0.58
KARS-211ENST00000569298 RBM42Q9BTD8 480 aaKnown RBP11.39□□□□□ -0.59
KARS-211ENST00000569298 FBLN2P98095 1184 aa11.25□□□□□ -0.61
KARS-211ENST00000569298 OSCARQ8IYS5 282 aa11.25□□□□□ -0.61
KARS-211ENST00000569298 MKRN4PQ13434 485 aaPredicted RBP11.2□□□□□ -0.62
KARS-211ENST00000569298 AKT1S1Q96B36 256 aa11.18□□□□□ -0.62
KARS-211ENST00000569298 SPDYE2BA6NHP3 402 aa11.12□□□□□ -0.63
KARS-211ENST00000569298 SPDYE6P0CI01 402 aa11.12□□□□□ -0.63
KARS-211ENST00000569298 SPDYE2Q495Y8 402 aa11.12□□□□□ -0.63
KARS-211ENST00000569298 POTEHQ6S545 545 aa11.07□□□□□ -0.64
KARS-211ENST00000569298 REM2Q8IYK8 340 aaPredicted RBP11.06□□□□□ -0.64
KARS-211ENST00000569298 CHRDL2Q6WN34 429 aa11.04□□□□□ -0.64
KARS-211ENST00000569298 ZNF692Q9BU19 519 aaPredicted RBP11□□□□□ -0.65
KARS-211ENST00000569298 SSUH2Q9Y2M2 353 aa11□□□□□ -0.65
KARS-211ENST00000569298 PITPNM1O00562 1244 aa10.94□□□□□ -0.66
KARS-211ENST00000569298 ERICH6Q7L0X2 663 aa10.85□□□□□ -0.67
KARS-211ENST00000569298 SPDYE1Q8NFV5 336 aaPredicted RBP10.85□□□□□ -0.67
KARS-211ENST00000569298 FXR2P51116 673 aaKnown RBP eCLIP10.83□□□□□ -0.68
KARS-211ENST00000569298 PABPN1Q86U42 306 aaKnown RBP eCLIP10.83□□□□□ -0.68
KARS-211ENST00000569298 PIP4P2Q8N4L2 257 aa10.83□□□□□ -0.68
KARS-211ENST00000569298 SPDYE4A6NLX3 237 aa10.78□□□□□ -0.68
KARS-211ENST00000569298 CLEC11AQ9Y240 323 aa10.78□□□□□ -0.68
KARS-211ENST00000569298 SLC24A1O60721 1099 aa10.72□□□□□ -0.69
KARS-211ENST00000569298 HRCP23327 699 aa10.7□□□□□ -0.7
KARS-211ENST00000569298 PRR29P0C7W0 189 aa10.67□□□□□ -0.7
KARS-211ENST00000569298 PRKAR2AP13861 404 aaKnown RBP10.65□□□□□ -0.7
KARS-211ENST00000569298 STAG3Q9UJ98 1225 aa10.62□□□□□ -0.71
KARS-211ENST00000569298 PRKCSHP14314 528 aaPredicted RBP10.61□□□□□ -0.71
KARS-211ENST00000569298 PROM2Q8N271 834 aa10.61□□□□□ -0.71
KARS-211ENST00000569298 FKBP8Q14318 412 aa10.57□□□□□ -0.72
KARS-211ENST00000569298 CHADLQ6NUI6 762 aa10.57□□□□□ -0.72
KARS-211ENST00000569298 HAX1O00165 279 aa10.55□□□□□ -0.72
KARS-211ENST00000569298 SP7Q8TDD2 431 aaPredicted RBP10.5□□□□□ -0.73
KARS-211ENST00000569298 C19orf67A6NJJ6 358 aa10.47□□□□□ -0.73
KARS-211ENST00000569298 CREBZFQ9NS37 354 aa10.47□□□□□ -0.73
KARS-211ENST00000569298 FARP1Q9Y4F1 1045 aaPredicted RBP10.46□□□□□ -0.73
KARS-211ENST00000569298 EVX2Q03828 476 aa10.45□□□□□ -0.74
KARS-211ENST00000569298 AMER1Q5JTC6 1135 aaPredicted RBP10.42□□□□□ -0.74
KARS-211ENST00000569298 DAXXQ9UER7 740 aaPredicted RBP10.39□□□□□ -0.75
KARS-211ENST00000569298 BCL11AQ9H165 835 aa10.37□□□□□ -0.75
KARS-211ENST00000569298 RTN4Q9NQC3 1192 aaKnown RBP10.37□□□□□ -0.75
KARS-211ENST00000569298 MNX1P50219 401 aaPredicted RBP10.34□□□□□ -0.75
KARS-211ENST00000569298 CD44P16070 742 aaKnown RBP10.33□□□□□ -0.76
KARS-211ENST00000569298 NPM1P06748 294 aaKnown RBP eCLIP10.29□□□□□ -0.76
KARS-211ENST00000569298 CENPBP07199 599 aaPredicted RBP10.27□□□□□ -0.77
KARS-211ENST00000569298 NISCHQ9Y2I1 1504 aa10.25□□□□□ -0.77
KARS-211ENST00000569298 GABBR2O75899 941 aa10.24□□□□□ -0.77
KARS-211ENST00000569298 MIER1Q8N108 512 aa10.24□□□□□ -0.77
KARS-211ENST00000569298 PLEKHG5O94827 1062 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms