Protein–RNA interactions for Protein: P0DP02

IGHV3-30-3, Immunoglobulin heavy variable 3-30-3, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-30-3P0DP02 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
IGHV3-30-3P0DP02 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC11.08□□□□□ -0.64
IGHV3-30-3P0DP02 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
IGHV3-30-3P0DP02 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
IGHV3-30-3P0DP02 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
IGHV3-30-3P0DP02 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
IGHV3-30-3P0DP02 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
IGHV3-30-3P0DP02 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
IGHV3-30-3P0DP02 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
IGHV3-30-3P0DP02 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
IGHV3-30-3P0DP02 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
IGHV3-30-3P0DP02 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
IGHV3-30-3P0DP02 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC11.08□□□□□ -0.64
IGHV3-30-3P0DP02 AC126335.2-201ENST00000623362 4637 ntBASIC11.08□□□□□ -0.64
IGHV3-30-3P0DP02 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC11.08□□□□□ -0.64
IGHV3-30-3P0DP02 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
IGHV3-30-3P0DP02 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
IGHV3-30-3P0DP02 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
IGHV3-30-3P0DP02 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
IGHV3-30-3P0DP02 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC11.08□□□□□ -0.64
IGHV3-30-3P0DP02 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
IGHV3-30-3P0DP02 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
IGHV3-30-3P0DP02 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
IGHV3-30-3P0DP02 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC11.07□□□□□ -0.64
IGHV3-30-3P0DP02 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC11.07□□□□□ -0.64
IGHV3-30-3P0DP02 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
IGHV3-30-3P0DP02 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC11.07□□□□□ -0.64
IGHV3-30-3P0DP02 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
IGHV3-30-3P0DP02 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
IGHV3-30-3P0DP02 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
IGHV3-30-3P0DP02 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
IGHV3-30-3P0DP02 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC11.07□□□□□ -0.64
IGHV3-30-3P0DP02 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
IGHV3-30-3P0DP02 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
IGHV3-30-3P0DP02 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC11.07□□□□□ -0.64
IGHV3-30-3P0DP02 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC11.07□□□□□ -0.64
IGHV3-30-3P0DP02 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
IGHV3-30-3P0DP02 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC11.07□□□□□ -0.64
IGHV3-30-3P0DP02 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
IGHV3-30-3P0DP02 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
IGHV3-30-3P0DP02 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
IGHV3-30-3P0DP02 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
IGHV3-30-3P0DP02 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC11.07□□□□□ -0.64
IGHV3-30-3P0DP02 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
IGHV3-30-3P0DP02 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC11.07□□□□□ -0.64
IGHV3-30-3P0DP02 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC11.07□□□□□ -0.64
IGHV3-30-3P0DP02 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
IGHV3-30-3P0DP02 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC11.07□□□□□ -0.64
IGHV3-30-3P0DP02 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
IGHV3-30-3P0DP02 HLA-H-201ENST00000383620 1096 ntBASIC11.07□□□□□ -0.64
IGHV3-30-3P0DP02 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC11.07□□□□□ -0.64
IGHV3-30-3P0DP02 HNRNPFP1-201ENST00000391730 1133 ntBASIC11.07□□□□□ -0.64
IGHV3-30-3P0DP02 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
IGHV3-30-3P0DP02 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC11.07□□□□□ -0.64
IGHV3-30-3P0DP02 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC11.07□□□□□ -0.64
IGHV3-30-3P0DP02 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC11.07□□□□□ -0.64
IGHV3-30-3P0DP02 FAM58DP-201ENST00000428076 619 ntBASIC11.07□□□□□ -0.64
IGHV3-30-3P0DP02 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC11.07□□□□□ -0.64
IGHV3-30-3P0DP02 AP006288.1-201ENST00000446065 395 ntBASIC11.07□□□□□ -0.64
IGHV3-30-3P0DP02 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
IGHV3-30-3P0DP02 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC11.07□□□□□ -0.64
IGHV3-30-3P0DP02 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC11.07□□□□□ -0.64
IGHV3-30-3P0DP02 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
IGHV3-30-3P0DP02 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
IGHV3-30-3P0DP02 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC11.07□□□□□ -0.64
IGHV3-30-3P0DP02 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC11.07□□□□□ -0.64
IGHV3-30-3P0DP02 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC11.07□□□□□ -0.64
IGHV3-30-3P0DP02 LINC01225-203ENST00000563550 1244 ntBASIC11.07□□□□□ -0.64
IGHV3-30-3P0DP02 AC004449.1-201ENST00000564240 433 ntBASIC11.07□□□□□ -0.64
IGHV3-30-3P0DP02 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC11.07□□□□□ -0.64
IGHV3-30-3P0DP02 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC11.07□□□□□ -0.64
IGHV3-30-3P0DP02 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC11.07□□□□□ -0.64
IGHV3-30-3P0DP02 HADH-212ENST00000638621 741 ntTSL 5 BASIC11.07□□□□□ -0.64
IGHV3-30-3P0DP02 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
IGHV3-30-3P0DP02 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
IGHV3-30-3P0DP02 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC11.07□□□□□ -0.64
IGHV3-30-3P0DP02 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC11.07□□□□□ -0.64
IGHV3-30-3P0DP02 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC11.07□□□□□ -0.64
IGHV3-30-3P0DP02 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC11.07□□□□□ -0.64
IGHV3-30-3P0DP02 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
IGHV3-30-3P0DP02 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
IGHV3-30-3P0DP02 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC11.07□□□□□ -0.64
IGHV3-30-3P0DP02 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC11.07□□□□□ -0.64
IGHV3-30-3P0DP02 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
IGHV3-30-3P0DP02 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
IGHV3-30-3P0DP02 C18orf15-201ENST00000623680 2534 ntBASIC11.07□□□□□ -0.64
IGHV3-30-3P0DP02 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC11.07□□□□□ -0.64
IGHV3-30-3P0DP02 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
IGHV3-30-3P0DP02 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
IGHV3-30-3P0DP02 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
IGHV3-30-3P0DP02 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
IGHV3-30-3P0DP02 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC11.07□□□□□ -0.64
IGHV3-30-3P0DP02 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC11.07□□□□□ -0.64
IGHV3-30-3P0DP02 AGAP7P-201ENST00000582299 2062 ntBASIC11.07□□□□□ -0.64
IGHV3-30-3P0DP02 AGAP14-201ENST00000624701 2060 ntBASIC11.07□□□□□ -0.64
IGHV3-30-3P0DP02 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
IGHV3-30-3P0DP02 AP3S2-216ENST00000617003 1561 ntBASIC11.07□□□□□ -0.64
IGHV3-30-3P0DP02 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
IGHV3-30-3P0DP02 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
IGHV3-30-3P0DP02 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms