Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
IFNA1P01562 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
IFNA1P01562 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
IFNA1P01562 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
IFNA1P01562 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
IFNA1P01562 SLC4A5-206ENST00000423644 6185 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
IFNA1P01562 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
IFNA1P01562 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
IFNA1P01562 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
IFNA1P01562 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
IFNA1P01562 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
IFNA1P01562 ITPRIP-201ENST00000278071 6807 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
IFNA1P01562 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
IFNA1P01562 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC12.34□□□□□ -0.43
IFNA1P01562 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
IFNA1P01562 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
IFNA1P01562 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.43
IFNA1P01562 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC12.33□□□□□ -0.43
IFNA1P01562 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
IFNA1P01562 AC152010.1-201ENST00000415779 2006 ntBASIC12.33□□□□□ -0.43
IFNA1P01562 PEAR1-201ENST00000292357 4866 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.43
IFNA1P01562 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
IFNA1P01562 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.43
IFNA1P01562 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.43
IFNA1P01562 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
IFNA1P01562 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
IFNA1P01562 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
IFNA1P01562 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
IFNA1P01562 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
IFNA1P01562 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
IFNA1P01562 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
IFNA1P01562 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
IFNA1P01562 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
IFNA1P01562 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC12.33□□□□□ -0.44
IFNA1P01562 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
IFNA1P01562 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC12.33□□□□□ -0.44
IFNA1P01562 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC12.33□□□□□ -0.44
IFNA1P01562 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC12.33□□□□□ -0.44
IFNA1P01562 RAC2-202ENST00000401529 569 ntTSL 4 BASIC12.33□□□□□ -0.44
IFNA1P01562 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC12.33□□□□□ -0.44
IFNA1P01562 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC12.33□□□□□ -0.44
IFNA1P01562 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC12.33□□□□□ -0.44
IFNA1P01562 GZMM-202ENST00000592501 941 ntTSL 3 BASIC12.33□□□□□ -0.44
IFNA1P01562 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
IFNA1P01562 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC12.33□□□□□ -0.44
IFNA1P01562 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC12.33□□□□□ -0.44
IFNA1P01562 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
IFNA1P01562 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC12.33□□□□□ -0.44
IFNA1P01562 AHI1-201ENST00000265602 4335 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
IFNA1P01562 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
IFNA1P01562 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
IFNA1P01562 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC12.33□□□□□ -0.44
IFNA1P01562 IGFN1-201ENST00000295591 4439 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
IFNA1P01562 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
IFNA1P01562 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC12.33□□□□□ -0.44
IFNA1P01562 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC12.33□□□□□ -0.44
IFNA1P01562 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC12.33□□□□□ -0.44
IFNA1P01562 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
IFNA1P01562 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
IFNA1P01562 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
IFNA1P01562 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC12.32□□□□□ -0.44
IFNA1P01562 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC12.32□□□□□ -0.44
IFNA1P01562 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
IFNA1P01562 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
IFNA1P01562 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
IFNA1P01562 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC12.32□□□□□ -0.44
IFNA1P01562 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
IFNA1P01562 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC12.32□□□□□ -0.44
IFNA1P01562 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC12.32□□□□□ -0.44
IFNA1P01562 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
IFNA1P01562 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
IFNA1P01562 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
IFNA1P01562 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC12.32□□□□□ -0.44
IFNA1P01562 AL358334.2-201ENST00000553648 4714 ntTSL 2 BASIC12.32□□□□□ -0.44
IFNA1P01562 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
IFNA1P01562 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
IFNA1P01562 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
IFNA1P01562 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC12.32□□□□□ -0.44
IFNA1P01562 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
IFNA1P01562 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
IFNA1P01562 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
IFNA1P01562 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
IFNA1P01562 TSPY5P-201ENST00000426936 936 ntBASIC12.32□□□□□ -0.44
IFNA1P01562 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
IFNA1P01562 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC12.32□□□□□ -0.44
IFNA1P01562 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC12.32□□□□□ -0.44
IFNA1P01562 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
IFNA1P01562 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
IFNA1P01562 BX005266.1-201ENST00000473402 457 ntBASIC12.32□□□□□ -0.44
IFNA1P01562 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
IFNA1P01562 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC12.32□□□□□ -0.44
IFNA1P01562 AP005901.3-202ENST00000581653 237 ntBASIC12.32□□□□□ -0.44
IFNA1P01562 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC12.32□□□□□ -0.44
IFNA1P01562 AC011498.5-201ENST00000592027 486 ntBASIC12.32□□□□□ -0.44
IFNA1P01562 AP006294.2-201ENST00000641667 209 ntBASIC12.32□□□□□ -0.44
IFNA1P01562 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
IFNA1P01562 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
IFNA1P01562 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC12.32□□□□□ -0.44
IFNA1P01562 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
IFNA1P01562 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC12.32□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 67.1 ms