Protein–RNA interactions for Protein: O95741

CPNE6, Copine-6, humanhuman

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6O95741 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CPNE6O95741 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CPNE6O95741 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CPNE6O95741 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CPNE6O95741 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC15.25■□□□□ 0.03
CPNE6O95741 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CPNE6O95741 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC15.25■□□□□ 0.03
CPNE6O95741 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CPNE6O95741 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CPNE6O95741 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC15.25■□□□□ 0.03
CPNE6O95741 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CPNE6O95741 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CPNE6O95741 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC15.25■□□□□ 0.03
CPNE6O95741 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CPNE6O95741 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
CPNE6O95741 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC15.25■□□□□ 0.03
CPNE6O95741 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
CPNE6O95741 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC15.25■□□□□ 0.03
CPNE6O95741 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CPNE6O95741 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC15.25■□□□□ 0.03
CPNE6O95741 TOMM22P5-201ENST00000416399 439 ntBASIC15.25■□□□□ 0.03
CPNE6O95741 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC15.25■□□□□ 0.03
CPNE6O95741 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC15.25■□□□□ 0.03
CPNE6O95741 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC15.25■□□□□ 0.03
CPNE6O95741 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
CPNE6O95741 USP40-206ENST00000443711 628 ntTSL 2 BASIC15.25■□□□□ 0.03
CPNE6O95741 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC15.25■□□□□ 0.03
CPNE6O95741 FAM86LP-201ENST00000478302 853 ntBASIC15.25■□□□□ 0.03
CPNE6O95741 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC15.25■□□□□ 0.03
CPNE6O95741 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC15.25■□□□□ 0.03
CPNE6O95741 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC15.25■□□□□ 0.03
CPNE6O95741 NAA38-206ENST00000576384 424 ntTSL 2 BASIC15.25■□□□□ 0.03
CPNE6O95741 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC15.25■□□□□ 0.03
CPNE6O95741 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC15.25■□□□□ 0.03
CPNE6O95741 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC15.25■□□□□ 0.03
CPNE6O95741 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CPNE6O95741 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CPNE6O95741 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC15.25■□□□□ 0.03
CPNE6O95741 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CPNE6O95741 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CPNE6O95741 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CPNE6O95741 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CPNE6O95741 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CPNE6O95741 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CPNE6O95741 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CPNE6O95741 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC15.25■□□□□ 0.03
CPNE6O95741 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CPNE6O95741 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CPNE6O95741 KRT8P22-201ENST00000562317 1415 ntBASIC15.25■□□□□ 0.03
CPNE6O95741 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
CPNE6O95741 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC15.25■□□□□ 0.03
CPNE6O95741 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CPNE6O95741 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CPNE6O95741 POLL-206ENST00000370172 2308 ntTSL 2 BASIC15.25■□□□□ 0.03
CPNE6O95741 RERG-209ENST00000546331 1383 ntTSL 2 BASIC15.24■□□□□ 0.03
CPNE6O95741 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC15.24■□□□□ 0.03
CPNE6O95741 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
CPNE6O95741 TPO-203ENST00000346956 2923 ntTSL 5 BASIC15.24■□□□□ 0.03
CPNE6O95741 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
CPNE6O95741 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC15.24■□□□□ 0.03
CPNE6O95741 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC15.24■□□□□ 0.03
CPNE6O95741 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC15.24■□□□□ 0.03
CPNE6O95741 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC15.24■□□□□ 0.03
CPNE6O95741 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC15.24■□□□□ 0.03
CPNE6O95741 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC15.24■□□□□ 0.03
CPNE6O95741 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
CPNE6O95741 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CPNE6O95741 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC15.24■□□□□ 0.03
CPNE6O95741 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
CPNE6O95741 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CPNE6O95741 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CPNE6O95741 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CPNE6O95741 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CPNE6O95741 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CPNE6O95741 BOLA2P3-201ENST00000404566 256 ntBASIC15.24■□□□□ 0.03
CPNE6O95741 RPL28-204ENST00000431533 590 ntTSL 2 BASIC15.24■□□□□ 0.03
CPNE6O95741 KRT43P-201ENST00000434019 910 ntBASIC15.24■□□□□ 0.03
CPNE6O95741 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC15.24■□□□□ 0.03
CPNE6O95741 RPL28-206ENST00000558752 671 ntTSL 3 BASIC15.24■□□□□ 0.03
CPNE6O95741 ORC6-206ENST00000568364 888 ntTSL 5 BASIC15.24■□□□□ 0.03
CPNE6O95741 Six3os1_5.1-201ENST00000611000 271 ntBASIC15.24■□□□□ 0.03
CPNE6O95741 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC15.24■□□□□ 0.03
CPNE6O95741 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
CPNE6O95741 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CPNE6O95741 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CPNE6O95741 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
CPNE6O95741 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CPNE6O95741 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC15.24■□□□□ 0.03
CPNE6O95741 AC005089.1-201ENST00000619486 2241 ntBASIC15.24■□□□□ 0.03
CPNE6O95741 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
CPNE6O95741 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CPNE6O95741 REXO1L1P-202ENST00000608646 1974 ntBASIC15.24■□□□□ 0.03
CPNE6O95741 AC134407.2-201ENST00000625089 1978 ntBASIC15.24■□□□□ 0.03
CPNE6O95741 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC15.24■□□□□ 0.03
CPNE6O95741 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CPNE6O95741 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC15.24■□□□□ 0.03
CPNE6O95741 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CPNE6O95741 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC15.23■□□□□ 0.03
CPNE6O95741 AL109954.1-202ENST00000564051 2148 ntBASIC15.23■□□□□ 0.03
CPNE6O95741 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms