Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC13.06□□□□□ -0.32
ABCA1O95477 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC13.06□□□□□ -0.32
ABCA1O95477 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC13.06□□□□□ -0.32
ABCA1O95477 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC13.06□□□□□ -0.32
ABCA1O95477 AP002490.2-201ENST00000524791 560 ntBASIC13.06□□□□□ -0.32
ABCA1O95477 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC13.06□□□□□ -0.32
ABCA1O95477 KRT90P-201ENST00000549264 1064 ntBASIC13.06□□□□□ -0.32
ABCA1O95477 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC13.06□□□□□ -0.32
ABCA1O95477 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC13.06□□□□□ -0.32
ABCA1O95477 AL118558.3-201ENST00000607414 1079 ntBASIC13.06□□□□□ -0.32
ABCA1O95477 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ABCA1O95477 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
ABCA1O95477 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
ABCA1O95477 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC13.06□□□□□ -0.32
ABCA1O95477 AL691432.1-201ENST00000596308 1422 ntBASIC13.06□□□□□ -0.32
ABCA1O95477 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ABCA1O95477 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC13.06□□□□□ -0.32
ABCA1O95477 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
ABCA1O95477 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ABCA1O95477 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
ABCA1O95477 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC13.06□□□□□ -0.32
ABCA1O95477 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
ABCA1O95477 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
ABCA1O95477 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
ABCA1O95477 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ABCA1O95477 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ABCA1O95477 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
ABCA1O95477 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ABCA1O95477 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC13.06□□□□□ -0.32
ABCA1O95477 INTS4P2-202ENST00000614726 2019 ntBASIC13.06□□□□□ -0.32
ABCA1O95477 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
ABCA1O95477 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
ABCA1O95477 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC13.06□□□□□ -0.32
ABCA1O95477 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ABCA1O95477 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ABCA1O95477 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
ABCA1O95477 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ABCA1O95477 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ABCA1O95477 MIR326-201ENST00000362220 95 ntBASIC13.06□□□□□ -0.32
ABCA1O95477 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
ABCA1O95477 AC092506.1-202ENST00000401022 528 ntBASIC13.06□□□□□ -0.32
ABCA1O95477 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
ABCA1O95477 AC026954.1-201ENST00000429771 1293 ntBASIC13.06□□□□□ -0.32
ABCA1O95477 AC007969.1-201ENST00000433675 447 ntBASIC13.06□□□□□ -0.32
ABCA1O95477 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC13.06□□□□□ -0.32
ABCA1O95477 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC13.06□□□□□ -0.32
ABCA1O95477 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC13.06□□□□□ -0.32
ABCA1O95477 ENPP7P5-201ENST00000541031 1031 ntBASIC13.06□□□□□ -0.32
ABCA1O95477 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC13.06□□□□□ -0.32
ABCA1O95477 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC13.06□□□□□ -0.32
ABCA1O95477 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
ABCA1O95477 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC13.06□□□□□ -0.32
ABCA1O95477 AL008638.5-201ENST00000623814 1298 ntBASIC13.06□□□□□ -0.32
ABCA1O95477 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC13.06□□□□□ -0.32
ABCA1O95477 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC13.06□□□□□ -0.32
ABCA1O95477 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC13.06□□□□□ -0.32
ABCA1O95477 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
ABCA1O95477 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ABCA1O95477 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ABCA1O95477 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC13.06□□□□□ -0.32
ABCA1O95477 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
ABCA1O95477 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
ABCA1O95477 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ABCA1O95477 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ABCA1O95477 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
ABCA1O95477 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
ABCA1O95477 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ABCA1O95477 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
ABCA1O95477 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
ABCA1O95477 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ABCA1O95477 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
ABCA1O95477 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC13.05□□□□□ -0.32
ABCA1O95477 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC13.05□□□□□ -0.32
ABCA1O95477 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
ABCA1O95477 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC13.05□□□□□ -0.32
ABCA1O95477 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
ABCA1O95477 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
ABCA1O95477 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
ABCA1O95477 RPL13P2-201ENST00000440687 659 ntBASIC13.05□□□□□ -0.32
ABCA1O95477 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC13.05□□□□□ -0.32
ABCA1O95477 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC13.05□□□□□ -0.32
ABCA1O95477 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC13.05□□□□□ -0.32
ABCA1O95477 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC13.05□□□□□ -0.32
ABCA1O95477 AP001889.1-201ENST00000525414 633 ntBASIC13.05□□□□□ -0.32
ABCA1O95477 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC13.05□□□□□ -0.32
ABCA1O95477 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
ABCA1O95477 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC13.05□□□□□ -0.32
ABCA1O95477 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC13.05□□□□□ -0.32
ABCA1O95477 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC13.05□□□□□ -0.32
ABCA1O95477 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC13.05□□□□□ -0.32
ABCA1O95477 CNTNAP3P2-201ENST00000617175 3861 ntBASIC13.05□□□□□ -0.32
ABCA1O95477 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
ABCA1O95477 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC13.05□□□□□ -0.32
ABCA1O95477 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
ABCA1O95477 AC134312.5-201ENST00000568031 1313 ntBASIC13.05□□□□□ -0.32
ABCA1O95477 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
ABCA1O95477 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
ABCA1O95477 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC13.05□□□□□ -0.32
ABCA1O95477 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
ABCA1O95477 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 92.7 ms