Protein–RNA interactions for Protein: O75427

LRCH4, Leucine-rich repeat and calponin homology domain-containing protein 4, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH4O75427 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC16.12■□□□□ 0.17
LRCH4O75427 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LRCH4O75427 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRCH4O75427 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRCH4O75427 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRCH4O75427 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRCH4O75427 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LRCH4O75427 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRCH4O75427 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LRCH4O75427 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LRCH4O75427 CICP23-201ENST00000605013 2741 ntBASIC16.11■□□□□ 0.17
LRCH4O75427 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
LRCH4O75427 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LRCH4O75427 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRCH4O75427 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC16.11■□□□□ 0.17
LRCH4O75427 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRCH4O75427 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC16.11■□□□□ 0.17
LRCH4O75427 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LRCH4O75427 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRCH4O75427 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRCH4O75427 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRCH4O75427 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LRCH4O75427 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LRCH4O75427 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC16.11■□□□□ 0.17
LRCH4O75427 GAPDHP40-201ENST00000505218 1006 ntBASIC16.11■□□□□ 0.17
LRCH4O75427 REEP4-207ENST00000523293 913 ntTSL 3 BASIC16.11■□□□□ 0.17
LRCH4O75427 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LRCH4O75427 AC023310.3-201ENST00000557027 670 ntBASIC16.11■□□□□ 0.17
LRCH4O75427 AC100756.1-201ENST00000562736 682 ntBASIC16.11■□□□□ 0.17
LRCH4O75427 AC138749.3-201ENST00000567691 622 ntBASIC16.11■□□□□ 0.17
LRCH4O75427 AC116165.1-201ENST00000611806 668 ntBASIC16.11■□□□□ 0.17
LRCH4O75427 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRCH4O75427 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRCH4O75427 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC16.11■□□□□ 0.17
LRCH4O75427 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRCH4O75427 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRCH4O75427 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRCH4O75427 AC013726.1-201ENST00000563747 2285 ntBASIC16.11■□□□□ 0.17
LRCH4O75427 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LRCH4O75427 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRCH4O75427 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC16.11■□□□□ 0.17
LRCH4O75427 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRCH4O75427 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRCH4O75427 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRCH4O75427 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRCH4O75427 AL513477.1-201ENST00000602865 2407 ntBASIC16.1■□□□□ 0.17
LRCH4O75427 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRCH4O75427 ZBTB45P1-201ENST00000452761 1456 ntBASIC16.1■□□□□ 0.17
LRCH4O75427 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC16.1■□□□□ 0.17
LRCH4O75427 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LRCH4O75427 LINC01101-201ENST00000622953 1884 ntBASIC16.1■□□□□ 0.17
LRCH4O75427 SLC9A7P1-202ENST00000556476 2239 ntBASIC16.1■□□□□ 0.17
LRCH4O75427 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRCH4O75427 GSN-203ENST00000373808 2664 ntTSL 2 BASIC16.1■□□□□ 0.17
LRCH4O75427 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
LRCH4O75427 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LRCH4O75427 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC16.1■□□□□ 0.17
LRCH4O75427 DOC2GP-202ENST00000514950 1163 ntBASIC16.1■□□□□ 0.17
LRCH4O75427 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC16.1■□□□□ 0.17
LRCH4O75427 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC16.1■□□□□ 0.17
LRCH4O75427 RARRES2P5-201ENST00000564013 466 ntBASIC16.1■□□□□ 0.17
LRCH4O75427 NAA60-208ENST00000570819 833 ntTSL 2 BASIC16.1■□□□□ 0.17
LRCH4O75427 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LRCH4O75427 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC16.1■□□□□ 0.17
LRCH4O75427 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRCH4O75427 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC16.1■□□□□ 0.17
LRCH4O75427 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LRCH4O75427 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRCH4O75427 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LRCH4O75427 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
LRCH4O75427 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LRCH4O75427 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRCH4O75427 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LRCH4O75427 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC16.1■□□□□ 0.17
LRCH4O75427 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRCH4O75427 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRCH4O75427 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC16.1■□□□□ 0.17
LRCH4O75427 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRCH4O75427 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRCH4O75427 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
LRCH4O75427 AC012508.2-201ENST00000567613 1472 ntBASIC16.1■□□□□ 0.17
LRCH4O75427 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC16.1■□□□□ 0.17
LRCH4O75427 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC16.1■□□□□ 0.17
LRCH4O75427 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRCH4O75427 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LRCH4O75427 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
LRCH4O75427 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LRCH4O75427 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LRCH4O75427 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LRCH4O75427 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LRCH4O75427 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LRCH4O75427 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LRCH4O75427 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LRCH4O75427 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LRCH4O75427 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LRCH4O75427 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LRCH4O75427 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LRCH4O75427 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC16.09■□□□□ 0.17
LRCH4O75427 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LRCH4O75427 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms