Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PCDHGA12O60330 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PCDHGA12O60330 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC15.41■□□□□ 0.06
PCDHGA12O60330 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC15.41■□□□□ 0.06
PCDHGA12O60330 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
PCDHGA12O60330 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHGA12O60330 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHGA12O60330 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHGA12O60330 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC15.4■□□□□ 0.06
PCDHGA12O60330 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHGA12O60330 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC15.4■□□□□ 0.06
PCDHGA12O60330 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC15.4■□□□□ 0.06
PCDHGA12O60330 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHGA12O60330 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHGA12O60330 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHGA12O60330 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHGA12O60330 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHGA12O60330 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHGA12O60330 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHGA12O60330 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHGA12O60330 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHGA12O60330 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC15.4■□□□□ 0.06
PCDHGA12O60330 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC15.4■□□□□ 0.06
PCDHGA12O60330 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHGA12O60330 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHGA12O60330 CASK-202ENST00000378158 3848 ntTSL 5 BASIC15.4■□□□□ 0.06
PCDHGA12O60330 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHGA12O60330 BRF1-202ENST00000379932 884 ntTSL 5 BASIC15.4■□□□□ 0.06
PCDHGA12O60330 HAUS4P1-201ENST00000406739 1145 ntBASIC15.4■□□□□ 0.06
PCDHGA12O60330 KRT18P64-201ENST00000434946 1219 ntBASIC15.4■□□□□ 0.06
PCDHGA12O60330 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC15.4■□□□□ 0.06
PCDHGA12O60330 PHKG1P2-201ENST00000457537 863 ntBASIC15.4■□□□□ 0.06
PCDHGA12O60330 AC093433.1-201ENST00000458048 571 ntBASIC15.4■□□□□ 0.06
PCDHGA12O60330 VDAC1P7-201ENST00000462417 847 ntBASIC15.4■□□□□ 0.06
PCDHGA12O60330 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC15.4■□□□□ 0.06
PCDHGA12O60330 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC15.4■□□□□ 0.06
PCDHGA12O60330 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC15.4■□□□□ 0.06
PCDHGA12O60330 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC15.4■□□□□ 0.06
PCDHGA12O60330 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC15.4■□□□□ 0.06
PCDHGA12O60330 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC15.4■□□□□ 0.06
PCDHGA12O60330 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
PCDHGA12O60330 AC010328.2-201ENST00000597698 1111 ntBASIC15.4■□□□□ 0.06
PCDHGA12O60330 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC15.4■□□□□ 0.06
PCDHGA12O60330 METTL26-214ENST00000614890 801 ntTSL 3 BASIC15.4■□□□□ 0.06
PCDHGA12O60330 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHGA12O60330 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC15.4■□□□□ 0.06
PCDHGA12O60330 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHGA12O60330 RHOXF1P1-202ENST00000635473 501 ntBASIC15.4■□□□□ 0.06
PCDHGA12O60330 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
PCDHGA12O60330 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC15.4■□□□□ 0.06
PCDHGA12O60330 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHGA12O60330 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHGA12O60330 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC15.4■□□□□ 0.06
PCDHGA12O60330 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC15.4■□□□□ 0.06
PCDHGA12O60330 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHGA12O60330 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
PCDHGA12O60330 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC15.4■□□□□ 0.06
PCDHGA12O60330 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHGA12O60330 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC15.4■□□□□ 0.06
PCDHGA12O60330 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHGA12O60330 AP001282.1-201ENST00000531301 1499 ntBASIC15.4■□□□□ 0.06
PCDHGA12O60330 SUPT20HL2-201ENST00000486479 2409 ntBASIC15.39■□□□□ 0.05
PCDHGA12O60330 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC15.39■□□□□ 0.05
PCDHGA12O60330 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC15.39■□□□□ 0.05
PCDHGA12O60330 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHGA12O60330 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHGA12O60330 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHGA12O60330 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHGA12O60330 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
PCDHGA12O60330 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHGA12O60330 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHGA12O60330 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHGA12O60330 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHGA12O60330 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC15.39■□□□□ 0.05
PCDHGA12O60330 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
PCDHGA12O60330 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC15.39■□□□□ 0.05
PCDHGA12O60330 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC15.39■□□□□ 0.05
PCDHGA12O60330 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
PCDHGA12O60330 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC15.39■□□□□ 0.05
PCDHGA12O60330 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHGA12O60330 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHGA12O60330 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHGA12O60330 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHGA12O60330 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHGA12O60330 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHGA12O60330 ACKR1-201ENST00000368121 1240 ntBASIC15.39■□□□□ 0.05
PCDHGA12O60330 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHGA12O60330 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHGA12O60330 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHGA12O60330 AC136604.1-201ENST00000418535 575 ntBASIC15.39■□□□□ 0.05
PCDHGA12O60330 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC15.39■□□□□ 0.05
PCDHGA12O60330 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC15.39■□□□□ 0.05
PCDHGA12O60330 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC15.39■□□□□ 0.05
PCDHGA12O60330 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC15.39■□□□□ 0.05
PCDHGA12O60330 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHGA12O60330 DUX4L45-201ENST00000566406 1057 ntBASIC15.39■□□□□ 0.05
PCDHGA12O60330 AC000095.1-201ENST00000603208 874 ntBASIC15.39■□□□□ 0.05
PCDHGA12O60330 AC005252.2-201ENST00000624630 1141 ntBASIC15.39■□□□□ 0.05
PCDHGA12O60330 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC15.39■□□□□ 0.05
PCDHGA12O60330 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms