Protein–RNA interactions for Protein: O60264

SMARCA5, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5, humanhuman

Predicted RBP Predictions only

Length 1,052 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5O60264 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SMARCA5O60264 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC19.12■□□□□ 0.65
SMARCA5O60264 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SMARCA5O60264 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
SMARCA5O60264 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SMARCA5O60264 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SMARCA5O60264 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC19.11■□□□□ 0.65
SMARCA5O60264 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
SMARCA5O60264 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
SMARCA5O60264 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SMARCA5O60264 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SMARCA5O60264 POR-201ENST00000394893 2532 ntTSL 5 BASIC19.11■□□□□ 0.65
SMARCA5O60264 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC19.11■□□□□ 0.65
SMARCA5O60264 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
SMARCA5O60264 AC007541.1-201ENST00000570282 1469 ntBASIC19.11■□□□□ 0.65
SMARCA5O60264 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
SMARCA5O60264 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
SMARCA5O60264 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SMARCA5O60264 SLC7A15P-201ENST00000424028 1363 ntBASIC19.11■□□□□ 0.65
SMARCA5O60264 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
SMARCA5O60264 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SMARCA5O60264 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
SMARCA5O60264 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC19.11■□□□□ 0.65
SMARCA5O60264 MIR4745-201ENST00000577608 62 ntBASIC19.11■□□□□ 0.65
SMARCA5O60264 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SMARCA5O60264 AL132655.2-201ENST00000596276 594 ntBASIC19.11■□□□□ 0.65
SMARCA5O60264 AC008761.3-201ENST00000624803 892 ntBASIC19.11■□□□□ 0.65
SMARCA5O60264 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SMARCA5O60264 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SMARCA5O60264 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
SMARCA5O60264 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SMARCA5O60264 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC19.11■□□□□ 0.65
SMARCA5O60264 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC19.11■□□□□ 0.65
SMARCA5O60264 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC19.11■□□□□ 0.65
SMARCA5O60264 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC19.11■□□□□ 0.65
SMARCA5O60264 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
SMARCA5O60264 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SMARCA5O60264 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
SMARCA5O60264 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SMARCA5O60264 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SMARCA5O60264 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SMARCA5O60264 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SMARCA5O60264 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SMARCA5O60264 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SMARCA5O60264 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC19.1■□□□□ 0.65
SMARCA5O60264 AC009118.2-201ENST00000613275 655 ntBASIC19.1■□□□□ 0.65
SMARCA5O60264 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC19.1■□□□□ 0.65
SMARCA5O60264 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SMARCA5O60264 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SMARCA5O60264 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
SMARCA5O60264 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SMARCA5O60264 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SMARCA5O60264 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
SMARCA5O60264 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
SMARCA5O60264 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SMARCA5O60264 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC19.1■□□□□ 0.65
SMARCA5O60264 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC19.1■□□□□ 0.65
SMARCA5O60264 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
SMARCA5O60264 CICP24-201ENST00000605464 2705 ntBASIC19.09■□□□□ 0.65
SMARCA5O60264 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SMARCA5O60264 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC19.09■□□□□ 0.65
SMARCA5O60264 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC19.09■□□□□ 0.65
SMARCA5O60264 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC19.09■□□□□ 0.65
SMARCA5O60264 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC19.09■□□□□ 0.65
SMARCA5O60264 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
SMARCA5O60264 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
SMARCA5O60264 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC19.09■□□□□ 0.65
SMARCA5O60264 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SMARCA5O60264 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SMARCA5O60264 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC19.09■□□□□ 0.65
SMARCA5O60264 RHOA-206ENST00000454011 889 ntTSL 2 BASIC19.09■□□□□ 0.65
SMARCA5O60264 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
SMARCA5O60264 VDAC1P7-201ENST00000462417 847 ntBASIC19.09■□□□□ 0.65
SMARCA5O60264 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC19.09■□□□□ 0.65
SMARCA5O60264 FADS2-205ENST00000517839 469 ntTSL 3 BASIC19.09■□□□□ 0.65
SMARCA5O60264 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC19.09■□□□□ 0.65
SMARCA5O60264 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC19.09■□□□□ 0.65
SMARCA5O60264 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
SMARCA5O60264 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC19.09■□□□□ 0.65
SMARCA5O60264 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
SMARCA5O60264 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
SMARCA5O60264 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
SMARCA5O60264 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC19.09■□□□□ 0.65
SMARCA5O60264 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SMARCA5O60264 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC19.09■□□□□ 0.65
SMARCA5O60264 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC19.09■□□□□ 0.65
SMARCA5O60264 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SMARCA5O60264 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SMARCA5O60264 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SMARCA5O60264 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
SMARCA5O60264 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SMARCA5O60264 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SMARCA5O60264 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SMARCA5O60264 GSN-203ENST00000373808 2664 ntTSL 2 BASIC19.08■□□□□ 0.65
SMARCA5O60264 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
SMARCA5O60264 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
SMARCA5O60264 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SMARCA5O60264 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC19.08■□□□□ 0.65
SMARCA5O60264 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
SMARCA5O60264 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms