Protein–RNA interactions for Protein: O43927

CXCL13, C-X-C motif chemokine 13, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL13O43927 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC13.87□□□□□ -0.19
CXCL13O43927 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC13.87□□□□□ -0.19
CXCL13O43927 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
CXCL13O43927 HNRNPA1P48-201ENST00000562726 1377 ntBASIC13.87□□□□□ -0.19
CXCL13O43927 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
CXCL13O43927 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CXCL13O43927 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
CXCL13O43927 AC105917.1-201ENST00000506637 2539 ntBASIC13.87□□□□□ -0.19
CXCL13O43927 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC13.87□□□□□ -0.19
CXCL13O43927 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC13.87□□□□□ -0.19
CXCL13O43927 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
CXCL13O43927 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
CXCL13O43927 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CXCL13O43927 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC13.87□□□□□ -0.19
CXCL13O43927 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
CXCL13O43927 SUN1-204ENST00000403868 978 ntTSL 2 BASIC13.87□□□□□ -0.19
CXCL13O43927 RPL5P21-201ENST00000404620 815 ntBASIC13.87□□□□□ -0.19
CXCL13O43927 AL512384.1-201ENST00000406683 331 ntBASIC13.87□□□□□ -0.19
CXCL13O43927 GAPDHP21-201ENST00000450301 1010 ntBASIC13.87□□□□□ -0.19
CXCL13O43927 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC13.87□□□□□ -0.19
CXCL13O43927 GLI4-203ENST00000517468 963 ntTSL 5 BASIC13.87□□□□□ -0.19
CXCL13O43927 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC13.87□□□□□ -0.19
CXCL13O43927 CR383656.12-201ENST00000549567 513 ntBASIC13.87□□□□□ -0.19
CXCL13O43927 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC13.87□□□□□ -0.19
CXCL13O43927 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC13.87□□□□□ -0.19
CXCL13O43927 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
CXCL13O43927 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC13.87□□□□□ -0.19
CXCL13O43927 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
CXCL13O43927 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC13.87□□□□□ -0.19
CXCL13O43927 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CXCL13O43927 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CXCL13O43927 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
CXCL13O43927 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC13.87□□□□□ -0.19
CXCL13O43927 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
CXCL13O43927 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CXCL13O43927 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CXCL13O43927 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CXCL13O43927 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC13.87□□□□□ -0.19
CXCL13O43927 ABR-203ENST00000536794 2213 ntTSL 2 BASIC13.87□□□□□ -0.19
CXCL13O43927 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
CXCL13O43927 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC13.87□□□□□ -0.19
CXCL13O43927 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC13.87□□□□□ -0.19
CXCL13O43927 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CXCL13O43927 AC063926.2-201ENST00000623766 1308 ntBASIC13.87□□□□□ -0.19
CXCL13O43927 TSPY26P-202ENST00000565928 3884 ntBASIC13.87□□□□□ -0.19
CXCL13O43927 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
CXCL13O43927 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
CXCL13O43927 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
CXCL13O43927 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CXCL13O43927 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CXCL13O43927 API5-202ENST00000420461 2009 ntTSL 2 BASIC13.86□□□□□ -0.19
CXCL13O43927 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CXCL13O43927 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC13.86□□□□□ -0.19
CXCL13O43927 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC13.86□□□□□ -0.19
CXCL13O43927 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CXCL13O43927 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CXCL13O43927 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CXCL13O43927 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
CXCL13O43927 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CXCL13O43927 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CXCL13O43927 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
CXCL13O43927 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
CXCL13O43927 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CXCL13O43927 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
CXCL13O43927 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
CXCL13O43927 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
CXCL13O43927 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CXCL13O43927 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC13.86□□□□□ -0.19
CXCL13O43927 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CXCL13O43927 GAPDHP40-201ENST00000505218 1006 ntBASIC13.86□□□□□ -0.19
CXCL13O43927 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC13.86□□□□□ -0.19
CXCL13O43927 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC13.86□□□□□ -0.19
CXCL13O43927 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC13.86□□□□□ -0.19
CXCL13O43927 AC093813.1-201ENST00000605066 256 ntBASIC13.86□□□□□ -0.19
CXCL13O43927 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC13.86□□□□□ -0.19
CXCL13O43927 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CXCL13O43927 IGHV3-72-202ENST00000621503 303 ntBASIC13.86□□□□□ -0.19
CXCL13O43927 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
CXCL13O43927 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC13.86□□□□□ -0.19
CXCL13O43927 STK33-217ENST00000534493 1895 ntTSL 2 BASIC13.86□□□□□ -0.19
CXCL13O43927 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CXCL13O43927 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC13.86□□□□□ -0.19
CXCL13O43927 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CXCL13O43927 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CXCL13O43927 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
CXCL13O43927 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC13.86□□□□□ -0.19
CXCL13O43927 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC13.86□□□□□ -0.19
CXCL13O43927 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CXCL13O43927 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CXCL13O43927 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CXCL13O43927 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
CXCL13O43927 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
CXCL13O43927 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CXCL13O43927 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CXCL13O43927 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CXCL13O43927 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
CXCL13O43927 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CXCL13O43927 SSR4P1-203ENST00000599569 2260 ntBASIC13.85□□□□□ -0.19
CXCL13O43927 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
CXCL13O43927 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms