Protein–RNA interactions for Protein: O43909

EXTL3, Exostosin-like 3, humanhuman

Predictions only

Length 919 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3O43909 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
EXTL3O43909 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
EXTL3O43909 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
EXTL3O43909 CU639417.3-201ENST00000624240 1404 ntBASIC16.78■□□□□ 0.28
EXTL3O43909 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC16.78■□□□□ 0.28
EXTL3O43909 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
EXTL3O43909 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
EXTL3O43909 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
EXTL3O43909 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
EXTL3O43909 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC16.77■□□□□ 0.28
EXTL3O43909 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
EXTL3O43909 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
EXTL3O43909 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
EXTL3O43909 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
EXTL3O43909 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC16.77■□□□□ 0.28
EXTL3O43909 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
EXTL3O43909 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
EXTL3O43909 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
EXTL3O43909 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
EXTL3O43909 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
EXTL3O43909 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC16.77■□□□□ 0.28
EXTL3O43909 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
EXTL3O43909 HLA-V-201ENST00000429037 534 ntBASIC16.77■□□□□ 0.28
EXTL3O43909 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
EXTL3O43909 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC16.77■□□□□ 0.28
EXTL3O43909 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC16.77■□□□□ 0.28
EXTL3O43909 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
EXTL3O43909 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC16.77■□□□□ 0.28
EXTL3O43909 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC16.77■□□□□ 0.28
EXTL3O43909 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
EXTL3O43909 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC16.77■□□□□ 0.28
EXTL3O43909 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC16.77■□□□□ 0.28
EXTL3O43909 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
EXTL3O43909 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
EXTL3O43909 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
EXTL3O43909 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC16.77■□□□□ 0.27
EXTL3O43909 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC16.77■□□□□ 0.27
EXTL3O43909 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC16.77■□□□□ 0.27
EXTL3O43909 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
EXTL3O43909 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
EXTL3O43909 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
EXTL3O43909 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC16.77■□□□□ 0.27
EXTL3O43909 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC16.77■□□□□ 0.27
EXTL3O43909 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
EXTL3O43909 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC16.76■□□□□ 0.27
EXTL3O43909 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
EXTL3O43909 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC16.76■□□□□ 0.27
EXTL3O43909 AC093525.8-201ENST00000624099 1342 ntBASIC16.76■□□□□ 0.27
EXTL3O43909 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
EXTL3O43909 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC16.76■□□□□ 0.27
EXTL3O43909 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
EXTL3O43909 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
EXTL3O43909 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
EXTL3O43909 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC16.76■□□□□ 0.27
EXTL3O43909 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
EXTL3O43909 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
EXTL3O43909 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
EXTL3O43909 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
EXTL3O43909 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
EXTL3O43909 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC16.76■□□□□ 0.27
EXTL3O43909 ARSEP1-201ENST00000420443 635 ntBASIC16.76■□□□□ 0.27
EXTL3O43909 PTPA-220ENST00000436883 532 ntTSL 4 BASIC16.76■□□□□ 0.27
EXTL3O43909 AL162726.2-201ENST00000438986 1017 ntBASIC16.76■□□□□ 0.27
EXTL3O43909 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC16.76■□□□□ 0.27
EXTL3O43909 ATP5G2P4-201ENST00000442175 420 ntBASIC16.76■□□□□ 0.27
EXTL3O43909 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC16.76■□□□□ 0.27
EXTL3O43909 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC16.76■□□□□ 0.27
EXTL3O43909 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC16.76■□□□□ 0.27
EXTL3O43909 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC16.76■□□□□ 0.27
EXTL3O43909 MIR6752-201ENST00000618442 71 ntBASIC16.76■□□□□ 0.27
EXTL3O43909 CU634019.7-201ENST00000624153 1185 ntBASIC16.76■□□□□ 0.27
EXTL3O43909 FP236241.2-201ENST00000624906 1185 ntBASIC16.76■□□□□ 0.27
EXTL3O43909 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
EXTL3O43909 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
EXTL3O43909 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
EXTL3O43909 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
EXTL3O43909 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
EXTL3O43909 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC16.76■□□□□ 0.27
EXTL3O43909 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
EXTL3O43909 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
EXTL3O43909 AC007787.1-201ENST00000588095 1583 ntBASIC16.76■□□□□ 0.27
EXTL3O43909 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
EXTL3O43909 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
EXTL3O43909 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
EXTL3O43909 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC16.75■□□□□ 0.27
EXTL3O43909 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
EXTL3O43909 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
EXTL3O43909 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC16.75■□□□□ 0.27
EXTL3O43909 AGER-206ENST00000375070 1463 ntTSL 5 BASIC16.75■□□□□ 0.27
EXTL3O43909 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
EXTL3O43909 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC16.75■□□□□ 0.27
EXTL3O43909 CELP-203ENST00000624767 2414 ntTSL 5 BASIC16.75■□□□□ 0.27
EXTL3O43909 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
EXTL3O43909 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
EXTL3O43909 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
EXTL3O43909 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
EXTL3O43909 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
EXTL3O43909 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC16.75■□□□□ 0.27
EXTL3O43909 U91328.1-201ENST00000437528 223 ntBASIC16.75■□□□□ 0.27
EXTL3O43909 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms