Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
SGCEO43556 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SGCEO43556 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SGCEO43556 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SGCEO43556 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
SGCEO43556 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SGCEO43556 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SGCEO43556 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SGCEO43556 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SGCEO43556 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SGCEO43556 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
SGCEO43556 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
SGCEO43556 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SGCEO43556 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
SGCEO43556 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC13.81□□□□□ -0.2
SGCEO43556 RPL37AP1-201ENST00000412502 279 ntBASIC13.81□□□□□ -0.2
SGCEO43556 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC13.81□□□□□ -0.2
SGCEO43556 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SGCEO43556 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC13.81□□□□□ -0.2
SGCEO43556 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC13.81□□□□□ -0.2
SGCEO43556 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
SGCEO43556 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SGCEO43556 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
SGCEO43556 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC13.81□□□□□ -0.2
SGCEO43556 AC140878.1-201ENST00000565277 250 ntBASIC13.81□□□□□ -0.2
SGCEO43556 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC13.81□□□□□ -0.2
SGCEO43556 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
SGCEO43556 SPDYE12P-201ENST00000618416 771 ntBASIC13.81□□□□□ -0.2
SGCEO43556 AC073592.8-201ENST00000624126 511 ntBASIC13.81□□□□□ -0.2
SGCEO43556 AL033527.5-202ENST00000641632 1098 ntBASIC13.81□□□□□ -0.2
SGCEO43556 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SGCEO43556 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SGCEO43556 AMT-233ENST00000636522 1620 ntTSL 2 BASIC13.81□□□□□ -0.2
SGCEO43556 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC13.81□□□□□ -0.2
SGCEO43556 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC13.81□□□□□ -0.2
SGCEO43556 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SGCEO43556 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SGCEO43556 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
SGCEO43556 PPT1-215ENST00000641471 2368 ntBASIC13.81□□□□□ -0.2
SGCEO43556 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
SGCEO43556 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SGCEO43556 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC13.81□□□□□ -0.2
SGCEO43556 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC13.81□□□□□ -0.2
SGCEO43556 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SGCEO43556 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SGCEO43556 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SGCEO43556 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SGCEO43556 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SGCEO43556 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
SGCEO43556 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SGCEO43556 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC13.8□□□□□ -0.2
SGCEO43556 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SGCEO43556 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC13.8□□□□□ -0.2
SGCEO43556 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SGCEO43556 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SGCEO43556 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC13.8□□□□□ -0.2
SGCEO43556 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SGCEO43556 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SGCEO43556 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SGCEO43556 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SGCEO43556 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SGCEO43556 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SGCEO43556 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SGCEO43556 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
SGCEO43556 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC13.8□□□□□ -0.2
SGCEO43556 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SGCEO43556 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SGCEO43556 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
SGCEO43556 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
SGCEO43556 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC13.8□□□□□ -0.2
SGCEO43556 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
SGCEO43556 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SGCEO43556 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SGCEO43556 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SGCEO43556 WRB-204ENST00000398753 699 ntTSL 3 BASIC13.8□□□□□ -0.2
SGCEO43556 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC13.8□□□□□ -0.2
SGCEO43556 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC13.8□□□□□ -0.2
SGCEO43556 METTL21AP1-201ENST00000438852 635 ntBASIC13.8□□□□□ -0.2
SGCEO43556 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC13.8□□□□□ -0.2
SGCEO43556 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SGCEO43556 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC13.8□□□□□ -0.2
SGCEO43556 AC051619.7-201ENST00000568314 623 ntBASIC13.8□□□□□ -0.2
SGCEO43556 AL138828.2-201ENST00000615812 383 ntBASIC13.8□□□□□ -0.2
SGCEO43556 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
SGCEO43556 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SGCEO43556 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
SGCEO43556 KRT18P28-201ENST00000453838 1332 ntBASIC13.8□□□□□ -0.2
SGCEO43556 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC13.8□□□□□ -0.2
SGCEO43556 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SGCEO43556 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SGCEO43556 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SGCEO43556 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC13.8□□□□□ -0.2
SGCEO43556 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC13.8□□□□□ -0.2
SGCEO43556 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SGCEO43556 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SGCEO43556 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
SGCEO43556 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SGCEO43556 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SGCEO43556 API5-202ENST00000420461 2009 ntTSL 2 BASIC13.8□□□□□ -0.2
SGCEO43556 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC13.8□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms