Protein–RNA interactions for Protein: O15457

MSH4, MutS protein homolog 4, humanhuman

Predictions only

Length 936 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4O15457 REXO1L4P-201ENST00000605109 1937 ntBASIC17.31■□□□□ 0.36
MSH4O15457 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC17.31■□□□□ 0.36
MSH4O15457 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
MSH4O15457 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
MSH4O15457 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC17.31■□□□□ 0.36
MSH4O15457 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
MSH4O15457 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
MSH4O15457 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC17.31■□□□□ 0.36
MSH4O15457 AC005229.1-201ENST00000392885 409 ntBASIC17.31■□□□□ 0.36
MSH4O15457 AL645937.2-201ENST00000396808 931 ntBASIC17.31■□□□□ 0.36
MSH4O15457 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
MSH4O15457 KLF2P2-201ENST00000416807 1039 ntBASIC17.31■□□□□ 0.36
MSH4O15457 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC17.31■□□□□ 0.36
MSH4O15457 NUS1P3-201ENST00000423502 862 ntBASIC17.31■□□□□ 0.36
MSH4O15457 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
MSH4O15457 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
MSH4O15457 CROCCP4-201ENST00000457096 498 ntBASIC17.31■□□□□ 0.36
MSH4O15457 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC17.31■□□□□ 0.36
MSH4O15457 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
MSH4O15457 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
MSH4O15457 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
MSH4O15457 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
MSH4O15457 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
MSH4O15457 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
MSH4O15457 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
MSH4O15457 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
MSH4O15457 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
MSH4O15457 ING5-213ENST00000636051 4199 ntTSL 5 BASIC17.31■□□□□ 0.36
MSH4O15457 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
MSH4O15457 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
MSH4O15457 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
MSH4O15457 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
MSH4O15457 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC17.31■□□□□ 0.36
MSH4O15457 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC17.31■□□□□ 0.36
MSH4O15457 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
MSH4O15457 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
MSH4O15457 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
MSH4O15457 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
MSH4O15457 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
MSH4O15457 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
MSH4O15457 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC17.31■□□□□ 0.36
MSH4O15457 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC17.31■□□□□ 0.36
MSH4O15457 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
MSH4O15457 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC17.3■□□□□ 0.36
MSH4O15457 AC092384.3-202ENST00000564646 2873 ntBASIC17.3■□□□□ 0.36
MSH4O15457 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
MSH4O15457 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
MSH4O15457 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
MSH4O15457 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
MSH4O15457 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
MSH4O15457 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
MSH4O15457 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
MSH4O15457 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC17.3■□□□□ 0.36
MSH4O15457 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC17.3■□□□□ 0.36
MSH4O15457 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
MSH4O15457 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC17.3■□□□□ 0.36
MSH4O15457 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
MSH4O15457 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
MSH4O15457 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
MSH4O15457 AC092933.1-201ENST00000393644 945 ntBASIC17.3■□□□□ 0.36
MSH4O15457 AL139094.1-201ENST00000405549 1188 ntBASIC17.3■□□□□ 0.36
MSH4O15457 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC17.3■□□□□ 0.36
MSH4O15457 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC17.3■□□□□ 0.36
MSH4O15457 AC114812.1-204ENST00000449669 728 ntBASIC17.3■□□□□ 0.36
MSH4O15457 HILS1-202ENST00000545329 423 ntBASIC17.3■□□□□ 0.36
MSH4O15457 ORC6-206ENST00000568364 888 ntTSL 5 BASIC17.3■□□□□ 0.36
MSH4O15457 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC17.3■□□□□ 0.36
MSH4O15457 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
MSH4O15457 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
MSH4O15457 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
MSH4O15457 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
MSH4O15457 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
MSH4O15457 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
MSH4O15457 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
MSH4O15457 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
MSH4O15457 FES-204ENST00000414248 2327 ntTSL 2 BASIC17.3■□□□□ 0.36
MSH4O15457 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
MSH4O15457 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
MSH4O15457 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
MSH4O15457 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
MSH4O15457 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
MSH4O15457 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC17.29■□□□□ 0.36
MSH4O15457 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
MSH4O15457 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
MSH4O15457 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
MSH4O15457 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
MSH4O15457 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC17.29■□□□□ 0.36
MSH4O15457 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
MSH4O15457 AL109954.1-202ENST00000564051 2148 ntBASIC17.29■□□□□ 0.36
MSH4O15457 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
MSH4O15457 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
MSH4O15457 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC17.29■□□□□ 0.36
MSH4O15457 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
MSH4O15457 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC17.29■□□□□ 0.36
MSH4O15457 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
MSH4O15457 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
MSH4O15457 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC17.29■□□□□ 0.36
MSH4O15457 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
MSH4O15457 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC17.29■□□□□ 0.36
MSH4O15457 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms