Protein–RNA interactions for Protein: O00634

NTN3, Netrin-3, humanhuman

Predicted RBP Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NTN3O00634 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
NTN3O00634 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NTN3O00634 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NTN3O00634 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC14.47□□□□□ -0.09
NTN3O00634 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC14.47□□□□□ -0.09
NTN3O00634 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC14.47□□□□□ -0.09
NTN3O00634 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NTN3O00634 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
NTN3O00634 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC14.46□□□□□ -0.09
NTN3O00634 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NTN3O00634 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
NTN3O00634 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NTN3O00634 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC14.46□□□□□ -0.09
NTN3O00634 PKD1P1-201ENST00000458669 6805 ntBASIC14.46□□□□□ -0.09
NTN3O00634 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NTN3O00634 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
NTN3O00634 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
NTN3O00634 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NTN3O00634 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NTN3O00634 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC14.46□□□□□ -0.09
NTN3O00634 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
NTN3O00634 AL157414.3-201ENST00000624276 1954 ntBASIC14.46□□□□□ -0.09
NTN3O00634 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NTN3O00634 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC14.46□□□□□ -0.09
NTN3O00634 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
NTN3O00634 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
NTN3O00634 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
NTN3O00634 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
NTN3O00634 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NTN3O00634 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NTN3O00634 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC14.46□□□□□ -0.09
NTN3O00634 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
NTN3O00634 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC14.46□□□□□ -0.09
NTN3O00634 RNMTL1P1-201ENST00000454103 560 ntBASIC14.46□□□□□ -0.09
NTN3O00634 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC14.46□□□□□ -0.09
NTN3O00634 CDC23-208ENST00000505120 455 ntTSL 3 BASIC14.46□□□□□ -0.09
NTN3O00634 AC106794.1-201ENST00000506935 792 ntBASIC14.46□□□□□ -0.09
NTN3O00634 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC14.46□□□□□ -0.09
NTN3O00634 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
NTN3O00634 MIR4783-201ENST00000580343 82 ntBASIC14.46□□□□□ -0.09
NTN3O00634 RN7SL163P-201ENST00000583100 276 ntBASIC14.46□□□□□ -0.09
NTN3O00634 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC14.46□□□□□ -0.09
NTN3O00634 AC005324.6-201ENST00000587972 613 ntBASIC14.46□□□□□ -0.09
NTN3O00634 AL162426.1-201ENST00000624141 743 ntBASIC14.46□□□□□ -0.09
NTN3O00634 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC14.46□□□□□ -0.09
NTN3O00634 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC14.46□□□□□ -0.09
NTN3O00634 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NTN3O00634 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC14.46□□□□□ -0.09
NTN3O00634 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC14.46□□□□□ -0.09
NTN3O00634 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC14.46□□□□□ -0.09
NTN3O00634 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC14.46□□□□□ -0.09
NTN3O00634 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NTN3O00634 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
NTN3O00634 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.1
NTN3O00634 AC026471.1-201ENST00000564629 3026 ntBASIC14.46□□□□□ -0.1
NTN3O00634 AP003680.1-201ENST00000598970 3660 ntBASIC14.46□□□□□ -0.1
NTN3O00634 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.1
NTN3O00634 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
NTN3O00634 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
NTN3O00634 MST1L-201ENST00000442552 2185 ntBASIC14.46□□□□□ -0.1
NTN3O00634 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
NTN3O00634 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC14.46□□□□□ -0.1
NTN3O00634 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC14.46□□□□□ -0.1
NTN3O00634 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC14.46□□□□□ -0.1
NTN3O00634 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
NTN3O00634 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
NTN3O00634 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NTN3O00634 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
NTN3O00634 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
NTN3O00634 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
NTN3O00634 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NTN3O00634 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NTN3O00634 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NTN3O00634 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NTN3O00634 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC14.45□□□□□ -0.1
NTN3O00634 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC14.45□□□□□ -0.1
NTN3O00634 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
NTN3O00634 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
NTN3O00634 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NTN3O00634 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
NTN3O00634 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NTN3O00634 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
NTN3O00634 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NTN3O00634 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
NTN3O00634 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NTN3O00634 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
NTN3O00634 NPPA-201ENST00000376476 728 ntTSL 3 BASIC14.45□□□□□ -0.1
NTN3O00634 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NTN3O00634 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC14.45□□□□□ -0.1
NTN3O00634 AC011742.3-201ENST00000439053 820 ntBASIC14.45□□□□□ -0.1
NTN3O00634 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC14.45□□□□□ -0.1
NTN3O00634 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC14.45□□□□□ -0.1
NTN3O00634 RN7SL11P-201ENST00000471305 293 ntBASIC14.45□□□□□ -0.1
NTN3O00634 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC14.45□□□□□ -0.1
NTN3O00634 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC14.45□□□□□ -0.1
NTN3O00634 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
NTN3O00634 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC14.45□□□□□ -0.1
NTN3O00634 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC14.45□□□□□ -0.1
NTN3O00634 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC14.45□□□□□ -0.1
NTN3O00634 CSH2-206ENST00000560142 749 ntTSL 5 BASIC14.45□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms