Protein–RNA interactions for Protein: A0A1B0GX56

TRDV1, T-cell receptor delta variable 1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRDV1A0A1B0GX56 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRDV1A0A1B0GX56 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRDV1A0A1B0GX56 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRDV1A0A1B0GX56 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
TRDV1A0A1B0GX56 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRDV1A0A1B0GX56 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRDV1A0A1B0GX56 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRDV1A0A1B0GX56 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC13.67□□□□□ -0.22
TRDV1A0A1B0GX56 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
TRDV1A0A1B0GX56 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC13.67□□□□□ -0.22
TRDV1A0A1B0GX56 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRDV1A0A1B0GX56 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRDV1A0A1B0GX56 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TRDV1A0A1B0GX56 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRDV1A0A1B0GX56 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRDV1A0A1B0GX56 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRDV1A0A1B0GX56 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRDV1A0A1B0GX56 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC13.67□□□□□ -0.22
TRDV1A0A1B0GX56 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC13.67□□□□□ -0.22
TRDV1A0A1B0GX56 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC13.67□□□□□ -0.22
TRDV1A0A1B0GX56 HNRNPDP1-201ENST00000439535 754 ntBASIC13.67□□□□□ -0.22
TRDV1A0A1B0GX56 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC13.67□□□□□ -0.22
TRDV1A0A1B0GX56 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC13.67□□□□□ -0.22
TRDV1A0A1B0GX56 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC13.67□□□□□ -0.22
TRDV1A0A1B0GX56 CD63-210ENST00000550776 870 ntTSL 5 BASIC13.67□□□□□ -0.22
TRDV1A0A1B0GX56 AL138918.1-201ENST00000568306 659 ntBASIC13.67□□□□□ -0.22
TRDV1A0A1B0GX56 TCAP-202ENST00000578283 583 ntTSL 5 BASIC13.67□□□□□ -0.22
TRDV1A0A1B0GX56 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC13.67□□□□□ -0.22
TRDV1A0A1B0GX56 AC023141.13-201ENST00000604991 943 ntBASIC13.67□□□□□ -0.22
TRDV1A0A1B0GX56 AC010507.1-201ENST00000633895 436 ntBASIC13.67□□□□□ -0.22
TRDV1A0A1B0GX56 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRDV1A0A1B0GX56 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC13.67□□□□□ -0.22
TRDV1A0A1B0GX56 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC13.67□□□□□ -0.22
TRDV1A0A1B0GX56 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC13.67□□□□□ -0.22
TRDV1A0A1B0GX56 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRDV1A0A1B0GX56 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TRDV1A0A1B0GX56 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRDV1A0A1B0GX56 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC13.67□□□□□ -0.22
TRDV1A0A1B0GX56 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
TRDV1A0A1B0GX56 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
TRDV1A0A1B0GX56 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
TRDV1A0A1B0GX56 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC13.67□□□□□ -0.22
TRDV1A0A1B0GX56 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC13.67□□□□□ -0.22
TRDV1A0A1B0GX56 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC13.67□□□□□ -0.22
TRDV1A0A1B0GX56 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
TRDV1A0A1B0GX56 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRDV1A0A1B0GX56 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRDV1A0A1B0GX56 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TRDV1A0A1B0GX56 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRDV1A0A1B0GX56 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
TRDV1A0A1B0GX56 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRDV1A0A1B0GX56 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRDV1A0A1B0GX56 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TRDV1A0A1B0GX56 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC13.66□□□□□ -0.22
TRDV1A0A1B0GX56 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
TRDV1A0A1B0GX56 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
TRDV1A0A1B0GX56 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRDV1A0A1B0GX56 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRDV1A0A1B0GX56 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRDV1A0A1B0GX56 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
TRDV1A0A1B0GX56 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TRDV1A0A1B0GX56 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRDV1A0A1B0GX56 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
TRDV1A0A1B0GX56 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRDV1A0A1B0GX56 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRDV1A0A1B0GX56 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC13.66□□□□□ -0.22
TRDV1A0A1B0GX56 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TRDV1A0A1B0GX56 SF1-209ENST00000433274 2317 ntTSL 2 BASIC13.66□□□□□ -0.22
TRDV1A0A1B0GX56 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRDV1A0A1B0GX56 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TRDV1A0A1B0GX56 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRDV1A0A1B0GX56 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRDV1A0A1B0GX56 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TRDV1A0A1B0GX56 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRDV1A0A1B0GX56 CRYGEP-201ENST00000412192 528 ntBASIC13.66□□□□□ -0.22
TRDV1A0A1B0GX56 HCG4B-203ENST00000450128 991 ntBASIC13.66□□□□□ -0.22
TRDV1A0A1B0GX56 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC13.66□□□□□ -0.22
TRDV1A0A1B0GX56 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC13.66□□□□□ -0.22
TRDV1A0A1B0GX56 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC13.66□□□□□ -0.22
TRDV1A0A1B0GX56 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC13.66□□□□□ -0.22
TRDV1A0A1B0GX56 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRDV1A0A1B0GX56 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC13.66□□□□□ -0.22
TRDV1A0A1B0GX56 AC093458.2-201ENST00000623150 629 ntBASIC13.66□□□□□ -0.22
TRDV1A0A1B0GX56 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
TRDV1A0A1B0GX56 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRDV1A0A1B0GX56 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRDV1A0A1B0GX56 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC13.66□□□□□ -0.22
TRDV1A0A1B0GX56 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRDV1A0A1B0GX56 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC13.66□□□□□ -0.22
TRDV1A0A1B0GX56 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TRDV1A0A1B0GX56 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
TRDV1A0A1B0GX56 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TRDV1A0A1B0GX56 MST1P2-201ENST00000457982 2291 ntBASIC13.66□□□□□ -0.22
TRDV1A0A1B0GX56 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRDV1A0A1B0GX56 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRDV1A0A1B0GX56 USP4-203ENST00000415188 1454 ntTSL 3 BASIC13.66□□□□□ -0.22
TRDV1A0A1B0GX56 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
TRDV1A0A1B0GX56 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TRDV1A0A1B0GX56 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRDV1A0A1B0GX56 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms