Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
RNF103-CHMP3A0A140T963 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC15.05■□□□□ 0
RNF103-CHMP3A0A140T963 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC15.05■□□□□ 0
RNF103-CHMP3A0A140T963 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
RNF103-CHMP3A0A140T963 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
RNF103-CHMP3A0A140T963 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
RNF103-CHMP3A0A140T963 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
RNF103-CHMP3A0A140T963 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
RNF103-CHMP3A0A140T963 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
RNF103-CHMP3A0A140T963 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC15.05■□□□□ -0
RNF103-CHMP3A0A140T963 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC15.05■□□□□ -0
RNF103-CHMP3A0A140T963 YBX2P1-201ENST00000394192 760 ntBASIC15.05■□□□□ -0
RNF103-CHMP3A0A140T963 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC15.05■□□□□ -0
RNF103-CHMP3A0A140T963 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC15.05■□□□□ -0
RNF103-CHMP3A0A140T963 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC15.05■□□□□ -0
RNF103-CHMP3A0A140T963 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC15.05■□□□□ -0
RNF103-CHMP3A0A140T963 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC15.05■□□□□ -0
RNF103-CHMP3A0A140T963 SPCS2P4-201ENST00000436160 681 ntBASIC15.05■□□□□ -0
RNF103-CHMP3A0A140T963 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC15.05■□□□□ -0
RNF103-CHMP3A0A140T963 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC15.05■□□□□ -0
RNF103-CHMP3A0A140T963 AC243562.1-201ENST00000560672 389 ntBASIC15.05■□□□□ -0
RNF103-CHMP3A0A140T963 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC15.05■□□□□ -0
RNF103-CHMP3A0A140T963 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC15.05■□□□□ -0
RNF103-CHMP3A0A140T963 AP000842.3-202ENST00000569238 1080 ntBASIC15.05■□□□□ -0
RNF103-CHMP3A0A140T963 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC15.05■□□□□ -0
RNF103-CHMP3A0A140T963 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC15.05■□□□□ -0
RNF103-CHMP3A0A140T963 AC026120.1-201ENST00000611536 926 ntBASIC15.05■□□□□ -0
RNF103-CHMP3A0A140T963 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC15.05■□□□□ -0
RNF103-CHMP3A0A140T963 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC15.05■□□□□ -0
RNF103-CHMP3A0A140T963 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC15.05■□□□□ -0
RNF103-CHMP3A0A140T963 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC15.05■□□□□ -0
RNF103-CHMP3A0A140T963 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC15.05■□□□□ -0
RNF103-CHMP3A0A140T963 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC15.05■□□□□ -0
RNF103-CHMP3A0A140T963 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
RNF103-CHMP3A0A140T963 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
RNF103-CHMP3A0A140T963 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
RNF103-CHMP3A0A140T963 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC15.05■□□□□ -0
RNF103-CHMP3A0A140T963 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC15.05■□□□□ -0
RNF103-CHMP3A0A140T963 BNIP3P1-202ENST00000550043 1585 ntBASIC15.05■□□□□ -0
RNF103-CHMP3A0A140T963 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC15.05■□□□□ -0
RNF103-CHMP3A0A140T963 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
RNF103-CHMP3A0A140T963 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC15.05■□□□□ -0
RNF103-CHMP3A0A140T963 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
RNF103-CHMP3A0A140T963 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
RNF103-CHMP3A0A140T963 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ -0
RNF103-CHMP3A0A140T963 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC15.05■□□□□ -0
RNF103-CHMP3A0A140T963 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC15.05■□□□□ -0
RNF103-CHMP3A0A140T963 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
RNF103-CHMP3A0A140T963 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
RNF103-CHMP3A0A140T963 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
RNF103-CHMP3A0A140T963 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
RNF103-CHMP3A0A140T963 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC15.05■□□□□ -0
RNF103-CHMP3A0A140T963 NIN-202ENST00000324330 4364 ntTSL 5 BASIC15.05■□□□□ -0
RNF103-CHMP3A0A140T963 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
RNF103-CHMP3A0A140T963 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC15.04■□□□□ -0
RNF103-CHMP3A0A140T963 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC15.04■□□□□ -0
RNF103-CHMP3A0A140T963 TNN-203ENST00000622870 3719 ntTSL 5 BASIC15.04■□□□□ -0
RNF103-CHMP3A0A140T963 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC15.04■□□□□ -0
RNF103-CHMP3A0A140T963 USP28-214ENST00000545540 3431 ntTSL 2 BASIC15.04■□□□□ -0
RNF103-CHMP3A0A140T963 AC117489.1-201ENST00000625169 3217 ntBASIC15.04■□□□□ -0
RNF103-CHMP3A0A140T963 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC15.04■□□□□ -0
RNF103-CHMP3A0A140T963 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC15.04■□□□□ -0
RNF103-CHMP3A0A140T963 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
RNF103-CHMP3A0A140T963 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RNF103-CHMP3A0A140T963 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
RNF103-CHMP3A0A140T963 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
RNF103-CHMP3A0A140T963 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC15.04■□□□□ -0
RNF103-CHMP3A0A140T963 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RNF103-CHMP3A0A140T963 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC15.04■□□□□ -0
RNF103-CHMP3A0A140T963 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RNF103-CHMP3A0A140T963 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC15.04■□□□□ -0
RNF103-CHMP3A0A140T963 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC15.04■□□□□ -0
RNF103-CHMP3A0A140T963 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC15.04■□□□□ -0
RNF103-CHMP3A0A140T963 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC15.04■□□□□ -0
RNF103-CHMP3A0A140T963 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RNF103-CHMP3A0A140T963 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC15.04■□□□□ -0
RNF103-CHMP3A0A140T963 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
RNF103-CHMP3A0A140T963 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC15.04■□□□□ -0
RNF103-CHMP3A0A140T963 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC15.04■□□□□ -0
RNF103-CHMP3A0A140T963 FAM220BP-201ENST00000377689 816 ntBASIC15.04■□□□□ -0
RNF103-CHMP3A0A140T963 HLA-H-201ENST00000383620 1096 ntBASIC15.04■□□□□ -0
RNF103-CHMP3A0A140T963 MCCD1P2-201ENST00000423228 335 ntBASIC15.04■□□□□ -0
RNF103-CHMP3A0A140T963 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC15.04■□□□□ -0
RNF103-CHMP3A0A140T963 TIMM8BP1-201ENST00000452384 211 ntBASIC15.04■□□□□ -0
RNF103-CHMP3A0A140T963 AC079140.1-201ENST00000508039 487 ntBASIC15.04■□□□□ -0
RNF103-CHMP3A0A140T963 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC15.04■□□□□ -0
RNF103-CHMP3A0A140T963 KRT8P48-201ENST00000515599 1220 ntBASIC15.04■□□□□ -0
RNF103-CHMP3A0A140T963 IGHV3-62-201ENST00000520057 340 ntBASIC15.04■□□□□ -0
RNF103-CHMP3A0A140T963 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RNF103-CHMP3A0A140T963 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC15.04■□□□□ -0
RNF103-CHMP3A0A140T963 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RNF103-CHMP3A0A140T963 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC15.04■□□□□ -0
RNF103-CHMP3A0A140T963 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC15.04■□□□□ -0
RNF103-CHMP3A0A140T963 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RNF103-CHMP3A0A140T963 AC018892.3-201ENST00000623986 2499 ntBASIC15.04■□□□□ -0
RNF103-CHMP3A0A140T963 AC005912.2-201ENST00000619492 2400 ntBASIC15.04■□□□□ -0
RNF103-CHMP3A0A140T963 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RNF103-CHMP3A0A140T963 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
RNF103-CHMP3A0A140T963 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC15.04■□□□□ -0
RNF103-CHMP3A0A140T963 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 94.3 ms