Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC11.76□□□□□ -0.53
HLA-DRB4X5D2U9 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
HLA-DRB4X5D2U9 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
HLA-DRB4X5D2U9 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC11.76□□□□□ -0.53
HLA-DRB4X5D2U9 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC11.76□□□□□ -0.53
HLA-DRB4X5D2U9 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
HLA-DRB4X5D2U9 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
HLA-DRB4X5D2U9 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
HLA-DRB4X5D2U9 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
HLA-DRB4X5D2U9 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC11.76□□□□□ -0.53
HLA-DRB4X5D2U9 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC11.76□□□□□ -0.53
HLA-DRB4X5D2U9 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
HLA-DRB4X5D2U9 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
HLA-DRB4X5D2U9 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
HLA-DRB4X5D2U9 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC11.76□□□□□ -0.53
HLA-DRB4X5D2U9 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
HLA-DRB4X5D2U9 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
HLA-DRB4X5D2U9 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
HLA-DRB4X5D2U9 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
HLA-DRB4X5D2U9 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC11.76□□□□□ -0.53
HLA-DRB4X5D2U9 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
HLA-DRB4X5D2U9 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
HLA-DRB4X5D2U9 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
HLA-DRB4X5D2U9 WARS-232ENST00000556645 2508 ntTSL 5 BASIC11.76□□□□□ -0.53
HLA-DRB4X5D2U9 KLK8-202ENST00000320838 456 ntTSL 5 BASIC11.76□□□□□ -0.53
HLA-DRB4X5D2U9 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
HLA-DRB4X5D2U9 LCK-206ENST00000373564 2137 ntTSL 5 BASIC11.76□□□□□ -0.53
HLA-DRB4X5D2U9 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
HLA-DRB4X5D2U9 WRB-204ENST00000398753 699 ntTSL 3 BASIC11.76□□□□□ -0.53
HLA-DRB4X5D2U9 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
HLA-DRB4X5D2U9 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
HLA-DRB4X5D2U9 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC11.76□□□□□ -0.53
HLA-DRB4X5D2U9 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC11.76□□□□□ -0.53
HLA-DRB4X5D2U9 PTK7-212ENST00000476760 902 ntTSL 2 BASIC11.76□□□□□ -0.53
HLA-DRB4X5D2U9 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC11.76□□□□□ -0.53
HLA-DRB4X5D2U9 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC11.76□□□□□ -0.53
HLA-DRB4X5D2U9 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC11.76□□□□□ -0.53
HLA-DRB4X5D2U9 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC11.76□□□□□ -0.53
HLA-DRB4X5D2U9 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
HLA-DRB4X5D2U9 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC11.76□□□□□ -0.53
HLA-DRB4X5D2U9 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC11.76□□□□□ -0.53
HLA-DRB4X5D2U9 AC051619.7-201ENST00000568314 623 ntBASIC11.76□□□□□ -0.53
HLA-DRB4X5D2U9 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC11.76□□□□□ -0.53
HLA-DRB4X5D2U9 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC11.76□□□□□ -0.53
HLA-DRB4X5D2U9 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC11.76□□□□□ -0.53
HLA-DRB4X5D2U9 GPALPP1-207ENST00000611650 899 ntBASIC11.76□□□□□ -0.53
HLA-DRB4X5D2U9 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC11.76□□□□□ -0.53
HLA-DRB4X5D2U9 SPDYE12P-201ENST00000618416 771 ntBASIC11.76□□□□□ -0.53
HLA-DRB4X5D2U9 AC073592.8-201ENST00000624126 511 ntBASIC11.76□□□□□ -0.53
HLA-DRB4X5D2U9 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
HLA-DRB4X5D2U9 TMBIM7P-203ENST00000641617 1718 ntBASIC11.76□□□□□ -0.53
HLA-DRB4X5D2U9 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC11.76□□□□□ -0.53
HLA-DRB4X5D2U9 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC11.76□□□□□ -0.53
HLA-DRB4X5D2U9 KRT18P28-201ENST00000453838 1332 ntBASIC11.76□□□□□ -0.53
HLA-DRB4X5D2U9 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
HLA-DRB4X5D2U9 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC11.76□□□□□ -0.53
HLA-DRB4X5D2U9 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
HLA-DRB4X5D2U9 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
HLA-DRB4X5D2U9 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC11.76□□□□□ -0.53
HLA-DRB4X5D2U9 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
HLA-DRB4X5D2U9 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
HLA-DRB4X5D2U9 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC11.76□□□□□ -0.53
HLA-DRB4X5D2U9 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
HLA-DRB4X5D2U9 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC11.76□□□□□ -0.53
HLA-DRB4X5D2U9 ILF3-AS1-201ENST00000591501 1983 ntBASIC11.76□□□□□ -0.53
HLA-DRB4X5D2U9 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
HLA-DRB4X5D2U9 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
HLA-DRB4X5D2U9 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
HLA-DRB4X5D2U9 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
HLA-DRB4X5D2U9 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC11.75□□□□□ -0.53
HLA-DRB4X5D2U9 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
HLA-DRB4X5D2U9 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
HLA-DRB4X5D2U9 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
HLA-DRB4X5D2U9 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC11.75□□□□□ -0.53
HLA-DRB4X5D2U9 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
HLA-DRB4X5D2U9 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
HLA-DRB4X5D2U9 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
HLA-DRB4X5D2U9 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
HLA-DRB4X5D2U9 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
HLA-DRB4X5D2U9 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC11.75□□□□□ -0.53
HLA-DRB4X5D2U9 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
HLA-DRB4X5D2U9 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
HLA-DRB4X5D2U9 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
HLA-DRB4X5D2U9 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
HLA-DRB4X5D2U9 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
HLA-DRB4X5D2U9 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
HLA-DRB4X5D2U9 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
HLA-DRB4X5D2U9 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
HLA-DRB4X5D2U9 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
HLA-DRB4X5D2U9 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
HLA-DRB4X5D2U9 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
HLA-DRB4X5D2U9 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
HLA-DRB4X5D2U9 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
HLA-DRB4X5D2U9 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
HLA-DRB4X5D2U9 PON3-203ENST00000427422 894 ntTSL 3 BASIC11.75□□□□□ -0.53
HLA-DRB4X5D2U9 HIST3H2BA-201ENST00000436555 524 ntBASIC11.75□□□□□ -0.53
HLA-DRB4X5D2U9 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC11.75□□□□□ -0.53
HLA-DRB4X5D2U9 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC11.75□□□□□ -0.53
HLA-DRB4X5D2U9 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC11.75□□□□□ -0.53
HLA-DRB4X5D2U9 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC11.75□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms