Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC16.08■□□□□ 0.17
YIPF1Q9Y548 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
YIPF1Q9Y548 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC16.08■□□□□ 0.16
YIPF1Q9Y548 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
YIPF1Q9Y548 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.16
YIPF1Q9Y548 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
YIPF1Q9Y548 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
YIPF1Q9Y548 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
YIPF1Q9Y548 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
YIPF1Q9Y548 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
YIPF1Q9Y548 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
YIPF1Q9Y548 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
YIPF1Q9Y548 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
YIPF1Q9Y548 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
YIPF1Q9Y548 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
YIPF1Q9Y548 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
YIPF1Q9Y548 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC16.08■□□□□ 0.16
YIPF1Q9Y548 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
YIPF1Q9Y548 LSM5-207ENST00000410044 687 ntTSL 3 BASIC16.08■□□□□ 0.16
YIPF1Q9Y548 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
YIPF1Q9Y548 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC16.08■□□□□ 0.16
YIPF1Q9Y548 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC16.08■□□□□ 0.16
YIPF1Q9Y548 ACR-203ENST00000529621 708 ntTSL 5 BASIC16.08■□□□□ 0.16
YIPF1Q9Y548 EEF1DP1-201ENST00000585891 896 ntBASIC16.08■□□□□ 0.16
YIPF1Q9Y548 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC16.08■□□□□ 0.16
YIPF1Q9Y548 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
YIPF1Q9Y548 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
YIPF1Q9Y548 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
YIPF1Q9Y548 OVCH1-AS1-204ENST00000641955 5529 ntBASIC16.08■□□□□ 0.16
YIPF1Q9Y548 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
YIPF1Q9Y548 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
YIPF1Q9Y548 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
YIPF1Q9Y548 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
YIPF1Q9Y548 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC16.08■□□□□ 0.16
YIPF1Q9Y548 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
YIPF1Q9Y548 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
YIPF1Q9Y548 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
YIPF1Q9Y548 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC16.07■□□□□ 0.16
YIPF1Q9Y548 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC16.07■□□□□ 0.16
YIPF1Q9Y548 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
YIPF1Q9Y548 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
YIPF1Q9Y548 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC16.07■□□□□ 0.16
YIPF1Q9Y548 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
YIPF1Q9Y548 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC16.07■□□□□ 0.16
YIPF1Q9Y548 AC007969.1-201ENST00000433675 447 ntBASIC16.07■□□□□ 0.16
YIPF1Q9Y548 MTX1P1-201ENST00000440904 838 ntBASIC16.07■□□□□ 0.16
YIPF1Q9Y548 HOMER2P2-201ENST00000451621 847 ntBASIC16.07■□□□□ 0.16
YIPF1Q9Y548 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
YIPF1Q9Y548 AP006547.1-201ENST00000563435 692 ntBASIC16.07■□□□□ 0.16
YIPF1Q9Y548 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
YIPF1Q9Y548 PRKN-211ENST00000615065 261 ntTSL 5 BASIC16.07■□□□□ 0.16
YIPF1Q9Y548 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
YIPF1Q9Y548 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC16.07■□□□□ 0.16
YIPF1Q9Y548 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
YIPF1Q9Y548 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
YIPF1Q9Y548 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
YIPF1Q9Y548 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC16.07■□□□□ 0.16
YIPF1Q9Y548 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
YIPF1Q9Y548 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
YIPF1Q9Y548 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
YIPF1Q9Y548 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC16.07■□□□□ 0.16
YIPF1Q9Y548 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
YIPF1Q9Y548 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC16.07■□□□□ 0.16
YIPF1Q9Y548 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
YIPF1Q9Y548 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC16.07■□□□□ 0.16
YIPF1Q9Y548 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
YIPF1Q9Y548 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.07■□□□□ 0.16
YIPF1Q9Y548 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
YIPF1Q9Y548 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
YIPF1Q9Y548 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
YIPF1Q9Y548 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
YIPF1Q9Y548 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
YIPF1Q9Y548 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
YIPF1Q9Y548 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
YIPF1Q9Y548 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC16.06■□□□□ 0.16
YIPF1Q9Y548 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC16.06■□□□□ 0.16
YIPF1Q9Y548 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
YIPF1Q9Y548 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC16.06■□□□□ 0.16
YIPF1Q9Y548 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
YIPF1Q9Y548 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC16.06■□□□□ 0.16
YIPF1Q9Y548 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
YIPF1Q9Y548 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
YIPF1Q9Y548 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
YIPF1Q9Y548 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
YIPF1Q9Y548 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
YIPF1Q9Y548 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
YIPF1Q9Y548 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
YIPF1Q9Y548 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
YIPF1Q9Y548 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
YIPF1Q9Y548 MIR1247-201ENST00000408206 136 ntBASIC16.06■□□□□ 0.16
YIPF1Q9Y548 BTBD6P1-201ENST00000412176 1267 ntBASIC16.06■□□□□ 0.16
YIPF1Q9Y548 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC16.06■□□□□ 0.16
YIPF1Q9Y548 AC245100.3-201ENST00000441281 285 ntBASIC16.06■□□□□ 0.16
YIPF1Q9Y548 CNN2P10-201ENST00000443067 918 ntBASIC16.06■□□□□ 0.16
YIPF1Q9Y548 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
YIPF1Q9Y548 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC16.06■□□□□ 0.16
YIPF1Q9Y548 ZNF767P-206ENST00000513792 565 ntBASIC16.06■□□□□ 0.16
YIPF1Q9Y548 AC022616.1-201ENST00000518688 554 ntBASIC16.06■□□□□ 0.16
YIPF1Q9Y548 C2orf69P2-201ENST00000562032 1123 ntBASIC16.06■□□□□ 0.16
YIPF1Q9Y548 KLK3-211ENST00000597483 810 ntTSL 2 BASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms