Protein–RNA interactions for Protein: Q9Y3C5

RNF11, RING finger protein 11, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF11Q9Y3C5 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
RNF11Q9Y3C5 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RNF11Q9Y3C5 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RNF11Q9Y3C5 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
RNF11Q9Y3C5 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RNF11Q9Y3C5 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RNF11Q9Y3C5 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
RNF11Q9Y3C5 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RNF11Q9Y3C5 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC15.18■□□□□ 0.02
RNF11Q9Y3C5 STRN-202ENST00000379213 2254 ntTSL 5 BASIC15.18■□□□□ 0.02
RNF11Q9Y3C5 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC15.18■□□□□ 0.02
RNF11Q9Y3C5 PARN-202ENST00000420015 2360 ntTSL 2 BASIC15.18■□□□□ 0.02
RNF11Q9Y3C5 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RNF11Q9Y3C5 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC15.18■□□□□ 0.02
RNF11Q9Y3C5 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RNF11Q9Y3C5 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RNF11Q9Y3C5 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RNF11Q9Y3C5 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RNF11Q9Y3C5 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RNF11Q9Y3C5 AL139400.1-201ENST00000366220 510 ntBASIC15.18■□□□□ 0.02
RNF11Q9Y3C5 HNRNPFP1-201ENST00000391730 1133 ntBASIC15.18■□□□□ 0.02
RNF11Q9Y3C5 RPL37AP1-201ENST00000412502 279 ntBASIC15.18■□□□□ 0.02
RNF11Q9Y3C5 AC074338.1-201ENST00000416825 156 ntBASIC15.18■□□□□ 0.02
RNF11Q9Y3C5 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC15.18■□□□□ 0.02
RNF11Q9Y3C5 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC15.18■□□□□ 0.02
RNF11Q9Y3C5 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
RNF11Q9Y3C5 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC15.18■□□□□ 0.02
RNF11Q9Y3C5 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC15.18■□□□□ 0.02
RNF11Q9Y3C5 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC15.18■□□□□ 0.02
RNF11Q9Y3C5 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC15.18■□□□□ 0.02
RNF11Q9Y3C5 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC15.18■□□□□ 0.02
RNF11Q9Y3C5 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC15.18■□□□□ 0.02
RNF11Q9Y3C5 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RNF11Q9Y3C5 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
RNF11Q9Y3C5 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RNF11Q9Y3C5 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RNF11Q9Y3C5 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC15.18■□□□□ 0.02
RNF11Q9Y3C5 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC15.18■□□□□ 0.02
RNF11Q9Y3C5 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
RNF11Q9Y3C5 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RNF11Q9Y3C5 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
RNF11Q9Y3C5 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
RNF11Q9Y3C5 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
RNF11Q9Y3C5 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RNF11Q9Y3C5 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RNF11Q9Y3C5 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC15.17■□□□□ 0.02
RNF11Q9Y3C5 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC15.17■□□□□ 0.02
RNF11Q9Y3C5 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC15.17■□□□□ 0.02
RNF11Q9Y3C5 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RNF11Q9Y3C5 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC15.17■□□□□ 0.02
RNF11Q9Y3C5 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RNF11Q9Y3C5 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
RNF11Q9Y3C5 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RNF11Q9Y3C5 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RNF11Q9Y3C5 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC15.17■□□□□ 0.02
RNF11Q9Y3C5 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
RNF11Q9Y3C5 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RNF11Q9Y3C5 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC15.17■□□□□ 0.02
RNF11Q9Y3C5 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC15.17■□□□□ 0.02
RNF11Q9Y3C5 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RNF11Q9Y3C5 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC15.17■□□□□ 0.02
RNF11Q9Y3C5 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC15.17■□□□□ 0.02
RNF11Q9Y3C5 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RNF11Q9Y3C5 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RNF11Q9Y3C5 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC15.17■□□□□ 0.02
RNF11Q9Y3C5 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RNF11Q9Y3C5 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
RNF11Q9Y3C5 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RNF11Q9Y3C5 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RNF11Q9Y3C5 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC15.17■□□□□ 0.02
RNF11Q9Y3C5 VPS29-207ENST00000549970 818 ntTSL 3 BASIC15.17■□□□□ 0.02
RNF11Q9Y3C5 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC15.17■□□□□ 0.02
RNF11Q9Y3C5 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC15.17■□□□□ 0.02
RNF11Q9Y3C5 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC15.17■□□□□ 0.02
RNF11Q9Y3C5 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
RNF11Q9Y3C5 WDR88-203ENST00000592765 651 ntTSL 5 BASIC15.17■□□□□ 0.02
RNF11Q9Y3C5 COQ4-205ENST00000609948 956 ntTSL 2 BASIC15.17■□□□□ 0.02
RNF11Q9Y3C5 MIR6069-201ENST00000620069 79 ntBASIC15.17■□□□□ 0.02
RNF11Q9Y3C5 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC15.17■□□□□ 0.02
RNF11Q9Y3C5 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RNF11Q9Y3C5 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RNF11Q9Y3C5 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
RNF11Q9Y3C5 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
RNF11Q9Y3C5 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RNF11Q9Y3C5 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC15.17■□□□□ 0.02
RNF11Q9Y3C5 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RNF11Q9Y3C5 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RNF11Q9Y3C5 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RNF11Q9Y3C5 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC15.17■□□□□ 0.02
RNF11Q9Y3C5 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RNF11Q9Y3C5 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RNF11Q9Y3C5 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RNF11Q9Y3C5 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RNF11Q9Y3C5 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
RNF11Q9Y3C5 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RNF11Q9Y3C5 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RNF11Q9Y3C5 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RNF11Q9Y3C5 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RNF11Q9Y3C5 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
RNF11Q9Y3C5 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms