Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC17.67■□□□□ 0.42
PCDHA4Q9UN74 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC17.67■□□□□ 0.42
PCDHA4Q9UN74 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC17.67■□□□□ 0.42
PCDHA4Q9UN74 AC133539.2-201ENST00000604757 467 ntBASIC17.67■□□□□ 0.42
PCDHA4Q9UN74 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHA4Q9UN74 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC17.67■□□□□ 0.42
PCDHA4Q9UN74 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHA4Q9UN74 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
PCDHA4Q9UN74 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC17.67■□□□□ 0.42
PCDHA4Q9UN74 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
PCDHA4Q9UN74 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC17.66■□□□□ 0.42
PCDHA4Q9UN74 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHA4Q9UN74 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHA4Q9UN74 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHA4Q9UN74 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHA4Q9UN74 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
PCDHA4Q9UN74 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC17.66■□□□□ 0.42
PCDHA4Q9UN74 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHA4Q9UN74 BANP-201ENST00000286122 2368 ntTSL 5 BASIC17.66■□□□□ 0.42
PCDHA4Q9UN74 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
PCDHA4Q9UN74 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC17.66■□□□□ 0.42
PCDHA4Q9UN74 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC17.66■□□□□ 0.42
PCDHA4Q9UN74 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHA4Q9UN74 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHA4Q9UN74 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHA4Q9UN74 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
PCDHA4Q9UN74 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHA4Q9UN74 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC17.66■□□□□ 0.42
PCDHA4Q9UN74 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC17.66■□□□□ 0.42
PCDHA4Q9UN74 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC17.66■□□□□ 0.42
PCDHA4Q9UN74 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC17.66■□□□□ 0.42
PCDHA4Q9UN74 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
PCDHA4Q9UN74 INO80C-210ENST00000590757 595 ntTSL 2 BASIC17.66■□□□□ 0.42
PCDHA4Q9UN74 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHA4Q9UN74 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHA4Q9UN74 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHA4Q9UN74 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHA4Q9UN74 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHA4Q9UN74 AC093525.8-201ENST00000624099 1342 ntBASIC17.66■□□□□ 0.42
PCDHA4Q9UN74 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHA4Q9UN74 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC17.66■□□□□ 0.42
PCDHA4Q9UN74 PARN-202ENST00000420015 2360 ntTSL 2 BASIC17.66■□□□□ 0.42
PCDHA4Q9UN74 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHA4Q9UN74 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
PCDHA4Q9UN74 AC007787.1-201ENST00000588095 1583 ntBASIC17.66■□□□□ 0.42
PCDHA4Q9UN74 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHA4Q9UN74 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHA4Q9UN74 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC17.65■□□□□ 0.42
PCDHA4Q9UN74 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC17.65■□□□□ 0.42
PCDHA4Q9UN74 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHA4Q9UN74 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHA4Q9UN74 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC17.65■□□□□ 0.42
PCDHA4Q9UN74 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
PCDHA4Q9UN74 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
PCDHA4Q9UN74 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHA4Q9UN74 REXO1L4P-201ENST00000605109 1937 ntBASIC17.65■□□□□ 0.42
PCDHA4Q9UN74 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHA4Q9UN74 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
PCDHA4Q9UN74 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC17.65■□□□□ 0.42
PCDHA4Q9UN74 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHA4Q9UN74 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHA4Q9UN74 SOCS2P1-201ENST00000417727 557 ntBASIC17.65■□□□□ 0.42
PCDHA4Q9UN74 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC17.65■□□□□ 0.42
PCDHA4Q9UN74 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHA4Q9UN74 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHA4Q9UN74 GLI4-203ENST00000517468 963 ntTSL 5 BASIC17.65■□□□□ 0.42
PCDHA4Q9UN74 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
PCDHA4Q9UN74 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC17.65■□□□□ 0.42
PCDHA4Q9UN74 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC17.65■□□□□ 0.42
PCDHA4Q9UN74 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC17.65■□□□□ 0.42
PCDHA4Q9UN74 AC025048.6-201ENST00000634326 1161 ntBASIC17.65■□□□□ 0.42
PCDHA4Q9UN74 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHA4Q9UN74 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHA4Q9UN74 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHA4Q9UN74 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHA4Q9UN74 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHA4Q9UN74 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHA4Q9UN74 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHA4Q9UN74 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHA4Q9UN74 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHA4Q9UN74 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHA4Q9UN74 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC17.65■□□□□ 0.42
PCDHA4Q9UN74 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHA4Q9UN74 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC17.65■□□□□ 0.42
PCDHA4Q9UN74 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHA4Q9UN74 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
PCDHA4Q9UN74 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
PCDHA4Q9UN74 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
PCDHA4Q9UN74 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC17.64■□□□□ 0.42
PCDHA4Q9UN74 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.42
PCDHA4Q9UN74 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHA4Q9UN74 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC17.64■□□□□ 0.41
PCDHA4Q9UN74 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHA4Q9UN74 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
PCDHA4Q9UN74 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHA4Q9UN74 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHA4Q9UN74 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHA4Q9UN74 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHA4Q9UN74 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHA4Q9UN74 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms