Protein–RNA interactions for Protein: Q9NZC2

TREM2, Triggering receptor expressed on myeloid cells 2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREM2Q9NZC2 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
TREM2Q9NZC2 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC13.51□□□□□ -0.25
TREM2Q9NZC2 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TREM2Q9NZC2 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC13.51□□□□□ -0.25
TREM2Q9NZC2 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC13.51□□□□□ -0.25
TREM2Q9NZC2 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC13.51□□□□□ -0.25
TREM2Q9NZC2 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
TREM2Q9NZC2 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TREM2Q9NZC2 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TREM2Q9NZC2 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC13.5□□□□□ -0.25
TREM2Q9NZC2 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TREM2Q9NZC2 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC13.5□□□□□ -0.25
TREM2Q9NZC2 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
TREM2Q9NZC2 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC13.5□□□□□ -0.25
TREM2Q9NZC2 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC13.5□□□□□ -0.25
TREM2Q9NZC2 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
TREM2Q9NZC2 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TREM2Q9NZC2 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
TREM2Q9NZC2 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC13.5□□□□□ -0.25
TREM2Q9NZC2 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
TREM2Q9NZC2 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TREM2Q9NZC2 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TREM2Q9NZC2 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
TREM2Q9NZC2 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TREM2Q9NZC2 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TREM2Q9NZC2 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
TREM2Q9NZC2 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
TREM2Q9NZC2 METTL26-204ENST00000397665 558 ntTSL 2 BASIC13.5□□□□□ -0.25
TREM2Q9NZC2 SPDYE17-201ENST00000412399 783 ntBASIC13.5□□□□□ -0.25
TREM2Q9NZC2 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC13.5□□□□□ -0.25
TREM2Q9NZC2 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC13.5□□□□□ -0.25
TREM2Q9NZC2 GNAQP1-201ENST00000444815 1067 ntBASIC13.5□□□□□ -0.25
TREM2Q9NZC2 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TREM2Q9NZC2 SPDYE18-201ENST00000510091 1050 ntBASIC13.5□□□□□ -0.25
TREM2Q9NZC2 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
TREM2Q9NZC2 PRR29-204ENST00000577953 565 ntTSL 4 BASIC13.5□□□□□ -0.25
TREM2Q9NZC2 SSH2-210ENST00000582084 560 ntTSL 3 BASIC13.5□□□□□ -0.25
TREM2Q9NZC2 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
TREM2Q9NZC2 CECR7-204ENST00000609932 568 ntTSL 2 BASIC13.5□□□□□ -0.25
TREM2Q9NZC2 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC13.5□□□□□ -0.25
TREM2Q9NZC2 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
TREM2Q9NZC2 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TREM2Q9NZC2 AC020658.6-201ENST00000623564 1870 ntBASIC13.5□□□□□ -0.25
TREM2Q9NZC2 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
TREM2Q9NZC2 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
TREM2Q9NZC2 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC13.5□□□□□ -0.25
TREM2Q9NZC2 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
TREM2Q9NZC2 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
TREM2Q9NZC2 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
TREM2Q9NZC2 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
TREM2Q9NZC2 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
TREM2Q9NZC2 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TREM2Q9NZC2 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC13.5□□□□□ -0.25
TREM2Q9NZC2 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC13.5□□□□□ -0.25
TREM2Q9NZC2 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TREM2Q9NZC2 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
TREM2Q9NZC2 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
TREM2Q9NZC2 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
TREM2Q9NZC2 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TREM2Q9NZC2 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
TREM2Q9NZC2 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC13.49□□□□□ -0.25
TREM2Q9NZC2 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TREM2Q9NZC2 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
TREM2Q9NZC2 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
TREM2Q9NZC2 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
TREM2Q9NZC2 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
TREM2Q9NZC2 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TREM2Q9NZC2 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TREM2Q9NZC2 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
TREM2Q9NZC2 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
TREM2Q9NZC2 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
TREM2Q9NZC2 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC13.49□□□□□ -0.25
TREM2Q9NZC2 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC13.49□□□□□ -0.25
TREM2Q9NZC2 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC13.49□□□□□ -0.25
TREM2Q9NZC2 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TREM2Q9NZC2 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC13.49□□□□□ -0.25
TREM2Q9NZC2 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
TREM2Q9NZC2 AC063926.2-201ENST00000623766 1308 ntBASIC13.49□□□□□ -0.25
TREM2Q9NZC2 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
TREM2Q9NZC2 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
TREM2Q9NZC2 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
TREM2Q9NZC2 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC13.49□□□□□ -0.25
TREM2Q9NZC2 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC13.49□□□□□ -0.25
TREM2Q9NZC2 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
TREM2Q9NZC2 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC13.49□□□□□ -0.25
TREM2Q9NZC2 SPTLC1P1-201ENST00000447199 261 ntBASIC13.49□□□□□ -0.25
TREM2Q9NZC2 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC13.49□□□□□ -0.25
TREM2Q9NZC2 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC13.49□□□□□ -0.25
TREM2Q9NZC2 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC13.49□□□□□ -0.25
TREM2Q9NZC2 EHF-205ENST00000527935 557 ntTSL 2 BASIC13.49□□□□□ -0.25
TREM2Q9NZC2 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TREM2Q9NZC2 AC104794.3-201ENST00000566840 1248 ntBASIC13.49□□□□□ -0.25
TREM2Q9NZC2 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
TREM2Q9NZC2 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC13.49□□□□□ -0.25
TREM2Q9NZC2 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
TREM2Q9NZC2 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
TREM2Q9NZC2 LRRFIP1P1-201ENST00000498774 2246 ntBASIC13.49□□□□□ -0.25
TREM2Q9NZC2 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC13.49□□□□□ -0.25
TREM2Q9NZC2 TMBIM7P-203ENST00000641617 1718 ntBASIC13.49□□□□□ -0.25
TREM2Q9NZC2 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms