Protein–RNA interactions for Protein: Q9NRR5

UBQLN4, Ubiquilin-4, humanhuman

Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4Q9NRR5 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
UBQLN4Q9NRR5 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
UBQLN4Q9NRR5 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
UBQLN4Q9NRR5 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
UBQLN4Q9NRR5 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
UBQLN4Q9NRR5 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
UBQLN4Q9NRR5 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
UBQLN4Q9NRR5 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
UBQLN4Q9NRR5 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
UBQLN4Q9NRR5 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
UBQLN4Q9NRR5 SPDYE19P-201ENST00000338590 713 ntBASIC14.29□□□□□ -0.12
UBQLN4Q9NRR5 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
UBQLN4Q9NRR5 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
UBQLN4Q9NRR5 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
UBQLN4Q9NRR5 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
UBQLN4Q9NRR5 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
UBQLN4Q9NRR5 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
UBQLN4Q9NRR5 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC14.29□□□□□ -0.12
UBQLN4Q9NRR5 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
UBQLN4Q9NRR5 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC14.29□□□□□ -0.12
UBQLN4Q9NRR5 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC14.29□□□□□ -0.12
UBQLN4Q9NRR5 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC14.29□□□□□ -0.12
UBQLN4Q9NRR5 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC14.29□□□□□ -0.12
UBQLN4Q9NRR5 AC036164.1-201ENST00000570544 333 ntBASIC14.29□□□□□ -0.12
UBQLN4Q9NRR5 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
UBQLN4Q9NRR5 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC14.29□□□□□ -0.12
UBQLN4Q9NRR5 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
UBQLN4Q9NRR5 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
UBQLN4Q9NRR5 AL391069.4-201ENST00000609583 481 ntBASIC14.29□□□□□ -0.12
UBQLN4Q9NRR5 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
UBQLN4Q9NRR5 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
UBQLN4Q9NRR5 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
UBQLN4Q9NRR5 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
UBQLN4Q9NRR5 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
UBQLN4Q9NRR5 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
UBQLN4Q9NRR5 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
UBQLN4Q9NRR5 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
UBQLN4Q9NRR5 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
UBQLN4Q9NRR5 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
UBQLN4Q9NRR5 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
UBQLN4Q9NRR5 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
UBQLN4Q9NRR5 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
UBQLN4Q9NRR5 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
UBQLN4Q9NRR5 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
UBQLN4Q9NRR5 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
UBQLN4Q9NRR5 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
UBQLN4Q9NRR5 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
UBQLN4Q9NRR5 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
UBQLN4Q9NRR5 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
UBQLN4Q9NRR5 BANP-201ENST00000286122 2368 ntTSL 5 BASIC14.29□□□□□ -0.12
UBQLN4Q9NRR5 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
UBQLN4Q9NRR5 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
UBQLN4Q9NRR5 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
UBQLN4Q9NRR5 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
UBQLN4Q9NRR5 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC14.28□□□□□ -0.12
UBQLN4Q9NRR5 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
UBQLN4Q9NRR5 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
UBQLN4Q9NRR5 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
UBQLN4Q9NRR5 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC14.28□□□□□ -0.12
UBQLN4Q9NRR5 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
UBQLN4Q9NRR5 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
UBQLN4Q9NRR5 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
UBQLN4Q9NRR5 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC14.28□□□□□ -0.12
UBQLN4Q9NRR5 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
UBQLN4Q9NRR5 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
UBQLN4Q9NRR5 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC14.28□□□□□ -0.12
UBQLN4Q9NRR5 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
UBQLN4Q9NRR5 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
UBQLN4Q9NRR5 OSM-203ENST00000403463 464 ntTSL 3 BASIC14.28□□□□□ -0.12
UBQLN4Q9NRR5 RAC2-204ENST00000406508 893 ntTSL 5 BASIC14.28□□□□□ -0.12
UBQLN4Q9NRR5 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
UBQLN4Q9NRR5 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC14.28□□□□□ -0.12
UBQLN4Q9NRR5 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
UBQLN4Q9NRR5 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
UBQLN4Q9NRR5 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
UBQLN4Q9NRR5 UGT1A2P-201ENST00000454886 866 ntBASIC14.28□□□□□ -0.12
UBQLN4Q9NRR5 PFN2-205ENST00000461868 613 ntTSL 2 BASIC14.28□□□□□ -0.12
UBQLN4Q9NRR5 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
UBQLN4Q9NRR5 AC093004.1-201ENST00000508850 424 ntBASIC14.28□□□□□ -0.12
UBQLN4Q9NRR5 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC14.28□□□□□ -0.12
UBQLN4Q9NRR5 RRP7BP-205ENST00000566851 833 ntBASIC14.28□□□□□ -0.12
UBQLN4Q9NRR5 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
UBQLN4Q9NRR5 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
UBQLN4Q9NRR5 AL096865.1-201ENST00000606796 927 ntBASIC14.28□□□□□ -0.12
UBQLN4Q9NRR5 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC14.28□□□□□ -0.12
UBQLN4Q9NRR5 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
UBQLN4Q9NRR5 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
UBQLN4Q9NRR5 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
UBQLN4Q9NRR5 NID2-208ENST00000617139 3827 ntTSL 5 BASIC14.28□□□□□ -0.12
UBQLN4Q9NRR5 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
UBQLN4Q9NRR5 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
UBQLN4Q9NRR5 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
UBQLN4Q9NRR5 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
UBQLN4Q9NRR5 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
UBQLN4Q9NRR5 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
UBQLN4Q9NRR5 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
UBQLN4Q9NRR5 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
UBQLN4Q9NRR5 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
UBQLN4Q9NRR5 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
UBQLN4Q9NRR5 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms