Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
NPAS2Q99743 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC15.28■□□□□ 0.04
NPAS2Q99743 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
NPAS2Q99743 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
NPAS2Q99743 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC15.28■□□□□ 0.04
NPAS2Q99743 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NPAS2Q99743 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NPAS2Q99743 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC15.28■□□□□ 0.04
NPAS2Q99743 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NPAS2Q99743 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NPAS2Q99743 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
NPAS2Q99743 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC15.28■□□□□ 0.04
NPAS2Q99743 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NPAS2Q99743 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NPAS2Q99743 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
NPAS2Q99743 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
NPAS2Q99743 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC15.27■□□□□ 0.04
NPAS2Q99743 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
NPAS2Q99743 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC15.27■□□□□ 0.04
NPAS2Q99743 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NPAS2Q99743 TUBB3P1-201ENST00000405796 1332 ntBASIC15.27■□□□□ 0.04
NPAS2Q99743 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
NPAS2Q99743 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NPAS2Q99743 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
NPAS2Q99743 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
NPAS2Q99743 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC15.27■□□□□ 0.04
NPAS2Q99743 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC15.27■□□□□ 0.04
NPAS2Q99743 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC15.27■□□□□ 0.04
NPAS2Q99743 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
NPAS2Q99743 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC15.27■□□□□ 0.04
NPAS2Q99743 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
NPAS2Q99743 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
NPAS2Q99743 CNN2P2-201ENST00000443536 909 ntBASIC15.27■□□□□ 0.04
NPAS2Q99743 CNN2P3-201ENST00000450201 906 ntBASIC15.27■□□□□ 0.04
NPAS2Q99743 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC15.27■□□□□ 0.04
NPAS2Q99743 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
NPAS2Q99743 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC15.27■□□□□ 0.04
NPAS2Q99743 SPCS2P1-201ENST00000561636 679 ntBASIC15.27■□□□□ 0.04
NPAS2Q99743 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC15.27■□□□□ 0.04
NPAS2Q99743 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NPAS2Q99743 AL136317.3-201ENST00000618497 906 ntBASIC15.27■□□□□ 0.04
NPAS2Q99743 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC15.27■□□□□ 0.04
NPAS2Q99743 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC15.27■□□□□ 0.03
NPAS2Q99743 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
NPAS2Q99743 MYO15B-237ENST00000642007 4893 ntBASIC15.27■□□□□ 0.03
NPAS2Q99743 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC15.27■□□□□ 0.03
NPAS2Q99743 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
NPAS2Q99743 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
NPAS2Q99743 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC15.27■□□□□ 0.03
NPAS2Q99743 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
NPAS2Q99743 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
NPAS2Q99743 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
NPAS2Q99743 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC15.27■□□□□ 0.03
NPAS2Q99743 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
NPAS2Q99743 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC15.27■□□□□ 0.03
NPAS2Q99743 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC15.26■□□□□ 0.03
NPAS2Q99743 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
NPAS2Q99743 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
NPAS2Q99743 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NPAS2Q99743 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC15.26■□□□□ 0.03
NPAS2Q99743 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC15.26■□□□□ 0.03
NPAS2Q99743 AJ011931.1-201ENST00000618749 2492 ntBASIC15.26■□□□□ 0.03
NPAS2Q99743 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
NPAS2Q99743 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
NPAS2Q99743 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
NPAS2Q99743 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
NPAS2Q99743 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC15.26■□□□□ 0.03
NPAS2Q99743 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
NPAS2Q99743 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NPAS2Q99743 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NPAS2Q99743 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NPAS2Q99743 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC15.26■□□□□ 0.03
NPAS2Q99743 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NPAS2Q99743 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
NPAS2Q99743 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
NPAS2Q99743 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NPAS2Q99743 WRB-204ENST00000398753 699 ntTSL 3 BASIC15.26■□□□□ 0.03
NPAS2Q99743 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
NPAS2Q99743 AC067863.1-201ENST00000494933 530 ntBASIC15.26■□□□□ 0.03
NPAS2Q99743 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC15.26■□□□□ 0.03
NPAS2Q99743 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC15.26■□□□□ 0.03
NPAS2Q99743 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC15.26■□□□□ 0.03
NPAS2Q99743 AC105233.2-201ENST00000523697 349 ntBASIC15.26■□□□□ 0.03
NPAS2Q99743 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC15.26■□□□□ 0.03
NPAS2Q99743 AF228730.5-201ENST00000530288 346 ntBASIC15.26■□□□□ 0.03
NPAS2Q99743 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NPAS2Q99743 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC15.26■□□□□ 0.03
NPAS2Q99743 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC15.26■□□□□ 0.03
NPAS2Q99743 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
NPAS2Q99743 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
NPAS2Q99743 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NPAS2Q99743 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
NPAS2Q99743 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
NPAS2Q99743 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NPAS2Q99743 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
NPAS2Q99743 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
NPAS2Q99743 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
NPAS2Q99743 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
NPAS2Q99743 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
NPAS2Q99743 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 206.6 ms