Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RPRD1AQ96P16 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
RPRD1AQ96P16 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RPRD1AQ96P16 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC15.98■□□□□ 0.15
RPRD1AQ96P16 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RPRD1AQ96P16 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RPRD1AQ96P16 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RPRD1AQ96P16 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RPRD1AQ96P16 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
RPRD1AQ96P16 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC15.98■□□□□ 0.15
RPRD1AQ96P16 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
RPRD1AQ96P16 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
RPRD1AQ96P16 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
RPRD1AQ96P16 SUN1-204ENST00000403868 978 ntTSL 2 BASIC15.98■□□□□ 0.15
RPRD1AQ96P16 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC15.98■□□□□ 0.15
RPRD1AQ96P16 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC15.98■□□□□ 0.15
RPRD1AQ96P16 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC15.98■□□□□ 0.15
RPRD1AQ96P16 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RPRD1AQ96P16 AL162726.2-201ENST00000438986 1017 ntBASIC15.98■□□□□ 0.15
RPRD1AQ96P16 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
RPRD1AQ96P16 NEU3-203ENST00000529024 581 ntTSL 3 BASIC15.98■□□□□ 0.15
RPRD1AQ96P16 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RPRD1AQ96P16 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC15.98■□□□□ 0.15
RPRD1AQ96P16 AC124283.3-201ENST00000570869 594 ntBASIC15.98■□□□□ 0.15
RPRD1AQ96P16 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC15.98■□□□□ 0.15
RPRD1AQ96P16 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC15.98■□□□□ 0.15
RPRD1AQ96P16 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RPRD1AQ96P16 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
RPRD1AQ96P16 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RPRD1AQ96P16 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RPRD1AQ96P16 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RPRD1AQ96P16 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RPRD1AQ96P16 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
RPRD1AQ96P16 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC15.98■□□□□ 0.15
RPRD1AQ96P16 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RPRD1AQ96P16 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RPRD1AQ96P16 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC15.98■□□□□ 0.15
RPRD1AQ96P16 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC15.98■□□□□ 0.15
RPRD1AQ96P16 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
RPRD1AQ96P16 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC15.98■□□□□ 0.15
RPRD1AQ96P16 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC15.98■□□□□ 0.15
RPRD1AQ96P16 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RPRD1AQ96P16 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RPRD1AQ96P16 AC136621.1-201ENST00000624017 2304 ntBASIC15.97■□□□□ 0.15
RPRD1AQ96P16 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC15.97■□□□□ 0.15
RPRD1AQ96P16 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RPRD1AQ96P16 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
RPRD1AQ96P16 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC15.97■□□□□ 0.15
RPRD1AQ96P16 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC15.97■□□□□ 0.15
RPRD1AQ96P16 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
RPRD1AQ96P16 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC15.97■□□□□ 0.15
RPRD1AQ96P16 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
RPRD1AQ96P16 AC105917.1-201ENST00000506637 2539 ntBASIC15.97■□□□□ 0.15
RPRD1AQ96P16 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
RPRD1AQ96P16 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC15.97■□□□□ 0.15
RPRD1AQ96P16 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
RPRD1AQ96P16 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC15.97■□□□□ 0.15
RPRD1AQ96P16 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
RPRD1AQ96P16 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RPRD1AQ96P16 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
RPRD1AQ96P16 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RPRD1AQ96P16 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RPRD1AQ96P16 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
RPRD1AQ96P16 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC15.97■□□□□ 0.15
RPRD1AQ96P16 RPL5P21-201ENST00000404620 815 ntBASIC15.97■□□□□ 0.15
RPRD1AQ96P16 AL512384.1-201ENST00000406683 331 ntBASIC15.97■□□□□ 0.15
RPRD1AQ96P16 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC15.97■□□□□ 0.15
RPRD1AQ96P16 GAPDHP21-201ENST00000450301 1010 ntBASIC15.97■□□□□ 0.15
RPRD1AQ96P16 RN7SL837P-201ENST00000463010 287 ntBASIC15.97■□□□□ 0.15
RPRD1AQ96P16 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC15.97■□□□□ 0.15
RPRD1AQ96P16 CR383656.12-201ENST00000549567 513 ntBASIC15.97■□□□□ 0.15
RPRD1AQ96P16 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RPRD1AQ96P16 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC15.97■□□□□ 0.15
RPRD1AQ96P16 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RPRD1AQ96P16 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
RPRD1AQ96P16 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
RPRD1AQ96P16 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC15.97■□□□□ 0.15
RPRD1AQ96P16 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
RPRD1AQ96P16 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC15.97■□□□□ 0.15
RPRD1AQ96P16 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RPRD1AQ96P16 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RPRD1AQ96P16 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
RPRD1AQ96P16 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RPRD1AQ96P16 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RPRD1AQ96P16 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RPRD1AQ96P16 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC15.97■□□□□ 0.15
RPRD1AQ96P16 STK33-217ENST00000534493 1895 ntTSL 2 BASIC15.97■□□□□ 0.15
RPRD1AQ96P16 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RPRD1AQ96P16 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
RPRD1AQ96P16 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RPRD1AQ96P16 BID-213ENST00000615414 2236 ntTSL 5 BASIC15.96■□□□□ 0.15
RPRD1AQ96P16 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RPRD1AQ96P16 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RPRD1AQ96P16 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RPRD1AQ96P16 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RPRD1AQ96P16 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
RPRD1AQ96P16 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RPRD1AQ96P16 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
RPRD1AQ96P16 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RPRD1AQ96P16 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms