Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SNX27Q96L92 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SNX27Q96L92 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SNX27Q96L92 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC16.67■□□□□ 0.26
SNX27Q96L92 LBX2-201ENST00000341396 886 ntTSL 3 BASIC16.67■□□□□ 0.26
SNX27Q96L92 RNU1-114P-201ENST00000365297 166 ntBASIC16.67■□□□□ 0.26
SNX27Q96L92 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
SNX27Q96L92 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SNX27Q96L92 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC16.67■□□□□ 0.26
SNX27Q96L92 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
SNX27Q96L92 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SNX27Q96L92 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC16.67■□□□□ 0.26
SNX27Q96L92 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
SNX27Q96L92 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
SNX27Q96L92 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC16.67■□□□□ 0.26
SNX27Q96L92 AGER-214ENST00000538695 487 ntTSL 2 BASIC16.67■□□□□ 0.26
SNX27Q96L92 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC16.67■□□□□ 0.26
SNX27Q96L92 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC16.67■□□□□ 0.26
SNX27Q96L92 GNRHR2-203ENST00000581100 1187 ntBASIC16.67■□□□□ 0.26
SNX27Q96L92 MIR4706-201ENST00000582134 82 ntBASIC16.67■□□□□ 0.26
SNX27Q96L92 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC16.67■□□□□ 0.26
SNX27Q96L92 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SNX27Q96L92 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
SNX27Q96L92 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC16.67■□□□□ 0.26
SNX27Q96L92 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SNX27Q96L92 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SNX27Q96L92 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
SNX27Q96L92 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SNX27Q96L92 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
SNX27Q96L92 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC16.67■□□□□ 0.26
SNX27Q96L92 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC16.67■□□□□ 0.26
SNX27Q96L92 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC16.67■□□□□ 0.26
SNX27Q96L92 AC020658.6-201ENST00000623564 1870 ntBASIC16.67■□□□□ 0.26
SNX27Q96L92 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
SNX27Q96L92 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
SNX27Q96L92 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SNX27Q96L92 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
SNX27Q96L92 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC16.66■□□□□ 0.26
SNX27Q96L92 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC16.66■□□□□ 0.26
SNX27Q96L92 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SNX27Q96L92 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
SNX27Q96L92 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SNX27Q96L92 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SNX27Q96L92 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SNX27Q96L92 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
SNX27Q96L92 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
SNX27Q96L92 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
SNX27Q96L92 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SNX27Q96L92 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SNX27Q96L92 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SNX27Q96L92 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.66■□□□□ 0.26
SNX27Q96L92 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC16.66■□□□□ 0.26
SNX27Q96L92 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
SNX27Q96L92 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
SNX27Q96L92 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC16.66■□□□□ 0.26
SNX27Q96L92 AL355334.1-201ENST00000417713 215 ntBASIC16.66■□□□□ 0.26
SNX27Q96L92 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC16.66■□□□□ 0.26
SNX27Q96L92 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC16.66■□□□□ 0.26
SNX27Q96L92 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC16.66■□□□□ 0.26
SNX27Q96L92 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC16.66■□□□□ 0.26
SNX27Q96L92 AC004066.1-201ENST00000502488 802 ntBASIC16.66■□□□□ 0.26
SNX27Q96L92 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SNX27Q96L92 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC16.66■□□□□ 0.26
SNX27Q96L92 AC007787.1-201ENST00000588095 1583 ntBASIC16.66■□□□□ 0.26
SNX27Q96L92 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC16.66■□□□□ 0.26
SNX27Q96L92 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SNX27Q96L92 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC16.66■□□□□ 0.26
SNX27Q96L92 AC007950.2-201ENST00000615045 2347 ntBASIC16.66■□□□□ 0.26
SNX27Q96L92 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC16.66■□□□□ 0.26
SNX27Q96L92 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SNX27Q96L92 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SNX27Q96L92 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SNX27Q96L92 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
SNX27Q96L92 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC16.66■□□□□ 0.26
SNX27Q96L92 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
SNX27Q96L92 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
SNX27Q96L92 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
SNX27Q96L92 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SNX27Q96L92 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
SNX27Q96L92 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC16.65■□□□□ 0.26
SNX27Q96L92 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SNX27Q96L92 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SNX27Q96L92 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SNX27Q96L92 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SNX27Q96L92 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SNX27Q96L92 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SNX27Q96L92 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC16.65■□□□□ 0.26
SNX27Q96L92 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SNX27Q96L92 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SNX27Q96L92 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SNX27Q96L92 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
SNX27Q96L92 AL136379.1-201ENST00000623471 2642 ntBASIC16.65■□□□□ 0.26
SNX27Q96L92 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
SNX27Q96L92 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SNX27Q96L92 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SNX27Q96L92 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SNX27Q96L92 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SNX27Q96L92 SERF2-206ENST00000409291 807 ntTSL 3 BASIC16.65■□□□□ 0.26
SNX27Q96L92 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SNX27Q96L92 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms