Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 AC138932.2-201ENST00000548268 1459 ntBASIC16.45■□□□□ 0.22
TRIM11Q96F44 AC126755.4-201ENST00000549796 1459 ntBASIC16.45■□□□□ 0.22
TRIM11Q96F44 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRIM11Q96F44 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC16.45■□□□□ 0.22
TRIM11Q96F44 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRIM11Q96F44 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC16.45■□□□□ 0.22
TRIM11Q96F44 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC16.45■□□□□ 0.22
TRIM11Q96F44 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRIM11Q96F44 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
TRIM11Q96F44 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRIM11Q96F44 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC16.45■□□□□ 0.22
TRIM11Q96F44 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRIM11Q96F44 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRIM11Q96F44 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRIM11Q96F44 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRIM11Q96F44 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
TRIM11Q96F44 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRIM11Q96F44 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC16.45■□□□□ 0.22
TRIM11Q96F44 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRIM11Q96F44 AC087499.5-201ENST00000452760 1342 ntBASIC16.45■□□□□ 0.22
TRIM11Q96F44 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRIM11Q96F44 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRIM11Q96F44 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRIM11Q96F44 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRIM11Q96F44 AC013726.1-201ENST00000563747 2285 ntBASIC16.44■□□□□ 0.22
TRIM11Q96F44 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRIM11Q96F44 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRIM11Q96F44 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC16.44■□□□□ 0.22
TRIM11Q96F44 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRIM11Q96F44 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC16.44■□□□□ 0.22
TRIM11Q96F44 CICP11-201ENST00000434745 2827 ntBASIC16.44■□□□□ 0.22
TRIM11Q96F44 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC16.44■□□□□ 0.22
TRIM11Q96F44 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRIM11Q96F44 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRIM11Q96F44 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRIM11Q96F44 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TRIM11Q96F44 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
TRIM11Q96F44 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TRIM11Q96F44 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRIM11Q96F44 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRIM11Q96F44 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TRIM11Q96F44 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TRIM11Q96F44 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC16.44■□□□□ 0.22
TRIM11Q96F44 FAM8A3P-201ENST00000427218 844 ntBASIC16.44■□□□□ 0.22
TRIM11Q96F44 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC16.44■□□□□ 0.22
TRIM11Q96F44 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TRIM11Q96F44 AC027369.6-201ENST00000525520 931 ntBASIC16.44■□□□□ 0.22
TRIM11Q96F44 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC16.44■□□□□ 0.22
TRIM11Q96F44 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TRIM11Q96F44 LINC01115-203ENST00000606068 577 ntBASIC16.44■□□□□ 0.22
TRIM11Q96F44 AL158211.3-201ENST00000607385 239 ntBASIC16.44■□□□□ 0.22
TRIM11Q96F44 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TRIM11Q96F44 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC16.44■□□□□ 0.22
TRIM11Q96F44 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRIM11Q96F44 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC16.44■□□□□ 0.22
TRIM11Q96F44 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TRIM11Q96F44 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC16.44■□□□□ 0.22
TRIM11Q96F44 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC16.44■□□□□ 0.22
TRIM11Q96F44 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TRIM11Q96F44 AL121723.1-201ENST00000445194 1519 ntBASIC16.44■□□□□ 0.22
TRIM11Q96F44 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRIM11Q96F44 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRIM11Q96F44 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRIM11Q96F44 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRIM11Q96F44 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
TRIM11Q96F44 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRIM11Q96F44 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRIM11Q96F44 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRIM11Q96F44 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TRIM11Q96F44 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRIM11Q96F44 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRIM11Q96F44 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
TRIM11Q96F44 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
TRIM11Q96F44 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
TRIM11Q96F44 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRIM11Q96F44 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRIM11Q96F44 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
TRIM11Q96F44 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TRIM11Q96F44 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRIM11Q96F44 FAM86GP-201ENST00000448322 971 ntBASIC16.43■□□□□ 0.22
TRIM11Q96F44 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC16.43■□□□□ 0.22
TRIM11Q96F44 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC16.43■□□□□ 0.22
TRIM11Q96F44 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC16.43■□□□□ 0.22
TRIM11Q96F44 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC16.43■□□□□ 0.22
TRIM11Q96F44 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
TRIM11Q96F44 AF228730.6-201ENST00000641497 218 ntBASIC16.43■□□□□ 0.22
TRIM11Q96F44 AC084121.3-201ENST00000641716 218 ntBASIC16.43■□□□□ 0.22
TRIM11Q96F44 AL109936.8-201ENST00000641772 604 ntBASIC16.43■□□□□ 0.22
TRIM11Q96F44 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRIM11Q96F44 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
TRIM11Q96F44 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TRIM11Q96F44 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC16.43■□□□□ 0.22
TRIM11Q96F44 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC16.43■□□□□ 0.22
TRIM11Q96F44 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC16.43■□□□□ 0.22
TRIM11Q96F44 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC16.43■□□□□ 0.22
TRIM11Q96F44 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
TRIM11Q96F44 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TRIM11Q96F44 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRIM11Q96F44 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRIM11Q96F44 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 62.8 ms