Protein–RNA interactions for Protein: Q969V3

NCLN, Nicalin, humanhuman

Predictions only

Length 563 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLNQ969V3 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC15.16■□□□□ 0.02
NCLNQ969V3 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
NCLNQ969V3 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
NCLNQ969V3 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
NCLNQ969V3 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
NCLNQ969V3 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NCLNQ969V3 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
NCLNQ969V3 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NCLNQ969V3 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC15.16■□□□□ 0.02
NCLNQ969V3 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC15.16■□□□□ 0.02
NCLNQ969V3 KLF2P3-201ENST00000451977 1087 ntBASIC15.16■□□□□ 0.02
NCLNQ969V3 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC15.16■□□□□ 0.02
NCLNQ969V3 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC15.16■□□□□ 0.02
NCLNQ969V3 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC15.16■□□□□ 0.02
NCLNQ969V3 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC15.16■□□□□ 0.02
NCLNQ969V3 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC15.16■□□□□ 0.02
NCLNQ969V3 AC024267.1-201ENST00000582320 895 ntBASIC15.16■□□□□ 0.02
NCLNQ969V3 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
NCLNQ969V3 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
NCLNQ969V3 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC15.16■□□□□ 0.02
NCLNQ969V3 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
NCLNQ969V3 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC15.16■□□□□ 0.02
NCLNQ969V3 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
NCLNQ969V3 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
NCLNQ969V3 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
NCLNQ969V3 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC15.16■□□□□ 0.02
NCLNQ969V3 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC15.16■□□□□ 0.02
NCLNQ969V3 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NCLNQ969V3 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
NCLNQ969V3 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NCLNQ969V3 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NCLNQ969V3 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
NCLNQ969V3 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NCLNQ969V3 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NCLNQ969V3 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NCLNQ969V3 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NCLNQ969V3 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC15.15■□□□□ 0.02
NCLNQ969V3 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC15.15■□□□□ 0.02
NCLNQ969V3 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NCLNQ969V3 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
NCLNQ969V3 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
NCLNQ969V3 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC15.15■□□□□ 0.02
NCLNQ969V3 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
NCLNQ969V3 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
NCLNQ969V3 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
NCLNQ969V3 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
NCLNQ969V3 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC15.15■□□□□ 0.02
NCLNQ969V3 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NCLNQ969V3 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
NCLNQ969V3 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
NCLNQ969V3 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC15.15■□□□□ 0.02
NCLNQ969V3 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NCLNQ969V3 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NCLNQ969V3 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NCLNQ969V3 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC15.15■□□□□ 0.02
NCLNQ969V3 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
NCLNQ969V3 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NCLNQ969V3 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NCLNQ969V3 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
NCLNQ969V3 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
NCLNQ969V3 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
NCLNQ969V3 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC15.15■□□□□ 0.02
NCLNQ969V3 AL353705.2-201ENST00000428243 662 ntBASIC15.15■□□□□ 0.02
NCLNQ969V3 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC15.15■□□□□ 0.02
NCLNQ969V3 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC15.15■□□□□ 0.02
NCLNQ969V3 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC15.15■□□□□ 0.02
NCLNQ969V3 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
NCLNQ969V3 PPP6R2P1-201ENST00000450880 1275 ntBASIC15.15■□□□□ 0.02
NCLNQ969V3 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC15.15■□□□□ 0.02
NCLNQ969V3 MAX-210ENST00000555419 765 ntTSL 5 BASIC15.15■□□□□ 0.02
NCLNQ969V3 AC051619.7-201ENST00000568314 623 ntBASIC15.15■□□□□ 0.02
NCLNQ969V3 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC15.15■□□□□ 0.02
NCLNQ969V3 AL355385.1-201ENST00000606123 409 ntBASIC15.15■□□□□ 0.02
NCLNQ969V3 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NCLNQ969V3 SRC-202ENST00000373558 4304 ntTSL 5 BASIC15.15■□□□□ 0.02
NCLNQ969V3 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NCLNQ969V3 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
NCLNQ969V3 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NCLNQ969V3 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC15.15■□□□□ 0.02
NCLNQ969V3 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
NCLNQ969V3 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NCLNQ969V3 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NCLNQ969V3 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
NCLNQ969V3 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NCLNQ969V3 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
NCLNQ969V3 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NCLNQ969V3 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NCLNQ969V3 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
NCLNQ969V3 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
NCLNQ969V3 AL009178.2-201ENST00000597278 2719 ntBASIC15.15■□□□□ 0.02
NCLNQ969V3 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NCLNQ969V3 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NCLNQ969V3 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NCLNQ969V3 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC15.15■□□□□ 0.02
NCLNQ969V3 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NCLNQ969V3 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC15.14■□□□□ 0.01
NCLNQ969V3 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
NCLNQ969V3 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC15.14■□□□□ 0.01
NCLNQ969V3 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
NCLNQ969V3 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms