Protein–RNA interactions for Protein: Q969T3

SNX21, Sorting nexin-21, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21Q969T3 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SNX21Q969T3 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC18.37■□□□□ 0.53
SNX21Q969T3 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SNX21Q969T3 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SNX21Q969T3 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
SNX21Q969T3 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SNX21Q969T3 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
SNX21Q969T3 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
SNX21Q969T3 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SNX21Q969T3 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SNX21Q969T3 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SNX21Q969T3 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SNX21Q969T3 AL591424.1-201ENST00000442569 1213 ntBASIC18.37■□□□□ 0.53
SNX21Q969T3 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC18.37■□□□□ 0.53
SNX21Q969T3 GATB-205ENST00000508611 605 ntTSL 2 BASIC18.37■□□□□ 0.53
SNX21Q969T3 SLED1-202ENST00000512051 380 ntBASIC18.37■□□□□ 0.53
SNX21Q969T3 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SNX21Q969T3 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SNX21Q969T3 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
SNX21Q969T3 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SNX21Q969T3 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SNX21Q969T3 UXT-AS1-201ENST00000590504 1525 ntBASIC18.37■□□□□ 0.53
SNX21Q969T3 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SNX21Q969T3 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SNX21Q969T3 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC18.37■□□□□ 0.53
SNX21Q969T3 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
SNX21Q969T3 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC18.37■□□□□ 0.53
SNX21Q969T3 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC18.37■□□□□ 0.53
SNX21Q969T3 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SNX21Q969T3 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC18.37■□□□□ 0.53
SNX21Q969T3 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SNX21Q969T3 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC18.37■□□□□ 0.53
SNX21Q969T3 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SNX21Q969T3 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC18.36■□□□□ 0.53
SNX21Q969T3 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
SNX21Q969T3 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SNX21Q969T3 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SNX21Q969T3 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
SNX21Q969T3 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
SNX21Q969T3 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
SNX21Q969T3 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
SNX21Q969T3 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SNX21Q969T3 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SNX21Q969T3 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
SNX21Q969T3 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SNX21Q969T3 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
SNX21Q969T3 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC18.36■□□□□ 0.53
SNX21Q969T3 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SNX21Q969T3 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SNX21Q969T3 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
SNX21Q969T3 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SNX21Q969T3 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC18.36■□□□□ 0.53
SNX21Q969T3 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SNX21Q969T3 AL353705.2-201ENST00000428243 662 ntBASIC18.36■□□□□ 0.53
SNX21Q969T3 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SNX21Q969T3 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC18.36■□□□□ 0.53
SNX21Q969T3 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SNX21Q969T3 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC18.36■□□□□ 0.53
SNX21Q969T3 KRT8P12-202ENST00000472924 1397 ntBASIC18.36■□□□□ 0.53
SNX21Q969T3 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SNX21Q969T3 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC18.36■□□□□ 0.53
SNX21Q969T3 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SNX21Q969T3 AC025181.2-201ENST00000606994 802 ntBASIC18.36■□□□□ 0.53
SNX21Q969T3 AC055717.3-201ENST00000622967 595 ntBASIC18.36■□□□□ 0.53
SNX21Q969T3 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC18.36■□□□□ 0.53
SNX21Q969T3 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SNX21Q969T3 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC18.36■□□□□ 0.53
SNX21Q969T3 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC18.36■□□□□ 0.53
SNX21Q969T3 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
SNX21Q969T3 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
SNX21Q969T3 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
SNX21Q969T3 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
SNX21Q969T3 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC18.35■□□□□ 0.53
SNX21Q969T3 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
SNX21Q969T3 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
SNX21Q969T3 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC18.35■□□□□ 0.53
SNX21Q969T3 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
SNX21Q969T3 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SNX21Q969T3 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
SNX21Q969T3 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SNX21Q969T3 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SNX21Q969T3 DEK-201ENST00000244776 1441 ntTSL 2 BASIC18.35■□□□□ 0.53
SNX21Q969T3 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SNX21Q969T3 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC18.35■□□□□ 0.53
SNX21Q969T3 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SNX21Q969T3 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC18.35■□□□□ 0.53
SNX21Q969T3 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SNX21Q969T3 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SNX21Q969T3 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
SNX21Q969T3 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SNX21Q969T3 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SNX21Q969T3 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
SNX21Q969T3 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SNX21Q969T3 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC18.35■□□□□ 0.53
SNX21Q969T3 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC18.35■□□□□ 0.53
SNX21Q969T3 KRT18P3-201ENST00000451602 1288 ntBASIC18.35■□□□□ 0.53
SNX21Q969T3 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SNX21Q969T3 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
SNX21Q969T3 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
SNX21Q969T3 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms