Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CKAP2Q8WWK9 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC15.46■□□□□ 0.07
CKAP2Q8WWK9 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
CKAP2Q8WWK9 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
CKAP2Q8WWK9 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CKAP2Q8WWK9 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
CKAP2Q8WWK9 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
CKAP2Q8WWK9 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CKAP2Q8WWK9 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC15.46■□□□□ 0.07
CKAP2Q8WWK9 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
CKAP2Q8WWK9 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CKAP2Q8WWK9 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CKAP2Q8WWK9 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
CKAP2Q8WWK9 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CKAP2Q8WWK9 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CKAP2Q8WWK9 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC15.46■□□□□ 0.07
CKAP2Q8WWK9 AC089987.1-201ENST00000551654 2209 ntBASIC15.46■□□□□ 0.07
CKAP2Q8WWK9 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
CKAP2Q8WWK9 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CKAP2Q8WWK9 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CKAP2Q8WWK9 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CKAP2Q8WWK9 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
CKAP2Q8WWK9 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
CKAP2Q8WWK9 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC15.46■□□□□ 0.07
CKAP2Q8WWK9 RNPS1P1-201ENST00000507437 918 ntBASIC15.46■□□□□ 0.07
CKAP2Q8WWK9 SDHD-206ENST00000528182 754 ntTSL 3 BASIC15.46■□□□□ 0.07
CKAP2Q8WWK9 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC15.46■□□□□ 0.07
CKAP2Q8WWK9 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC15.46■□□□□ 0.07
CKAP2Q8WWK9 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC15.46■□□□□ 0.07
CKAP2Q8WWK9 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC15.46■□□□□ 0.07
CKAP2Q8WWK9 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC15.46■□□□□ 0.07
CKAP2Q8WWK9 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
CKAP2Q8WWK9 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
CKAP2Q8WWK9 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CKAP2Q8WWK9 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CKAP2Q8WWK9 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
CKAP2Q8WWK9 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC15.46■□□□□ 0.07
CKAP2Q8WWK9 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC15.46■□□□□ 0.07
CKAP2Q8WWK9 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
CKAP2Q8WWK9 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CKAP2Q8WWK9 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC15.46■□□□□ 0.06
CKAP2Q8WWK9 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC15.46■□□□□ 0.06
CKAP2Q8WWK9 MST1P2-201ENST00000457982 2291 ntBASIC15.46■□□□□ 0.06
CKAP2Q8WWK9 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
CKAP2Q8WWK9 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC15.46■□□□□ 0.06
CKAP2Q8WWK9 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
CKAP2Q8WWK9 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
CKAP2Q8WWK9 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
CKAP2Q8WWK9 AC107918.4-201ENST00000641966 3141 ntBASIC15.46■□□□□ 0.06
CKAP2Q8WWK9 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CKAP2Q8WWK9 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
CKAP2Q8WWK9 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
CKAP2Q8WWK9 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CKAP2Q8WWK9 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CKAP2Q8WWK9 SF1-209ENST00000433274 2317 ntTSL 2 BASIC15.45■□□□□ 0.06
CKAP2Q8WWK9 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CKAP2Q8WWK9 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
CKAP2Q8WWK9 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
CKAP2Q8WWK9 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
CKAP2Q8WWK9 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CKAP2Q8WWK9 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
CKAP2Q8WWK9 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
CKAP2Q8WWK9 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
CKAP2Q8WWK9 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CKAP2Q8WWK9 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC15.45■□□□□ 0.06
CKAP2Q8WWK9 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC15.45■□□□□ 0.06
CKAP2Q8WWK9 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CKAP2Q8WWK9 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
CKAP2Q8WWK9 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
CKAP2Q8WWK9 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
CKAP2Q8WWK9 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CKAP2Q8WWK9 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC15.45■□□□□ 0.06
CKAP2Q8WWK9 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
CKAP2Q8WWK9 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC15.45■□□□□ 0.06
CKAP2Q8WWK9 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CKAP2Q8WWK9 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CKAP2Q8WWK9 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CKAP2Q8WWK9 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
CKAP2Q8WWK9 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CKAP2Q8WWK9 RHOQP3-201ENST00000437982 621 ntBASIC15.45■□□□□ 0.06
CKAP2Q8WWK9 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC15.45■□□□□ 0.06
CKAP2Q8WWK9 VN2R19P-201ENST00000442399 1052 ntBASIC15.45■□□□□ 0.06
CKAP2Q8WWK9 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC15.45■□□□□ 0.06
CKAP2Q8WWK9 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC15.45■□□□□ 0.06
CKAP2Q8WWK9 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CKAP2Q8WWK9 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC15.45■□□□□ 0.06
CKAP2Q8WWK9 AL138918.1-201ENST00000568306 659 ntBASIC15.45■□□□□ 0.06
CKAP2Q8WWK9 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CKAP2Q8WWK9 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CKAP2Q8WWK9 AL691432.3-201ENST00000621860 400 ntBASIC15.45■□□□□ 0.06
CKAP2Q8WWK9 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
CKAP2Q8WWK9 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
CKAP2Q8WWK9 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
CKAP2Q8WWK9 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
CKAP2Q8WWK9 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CKAP2Q8WWK9 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC15.45■□□□□ 0.06
CKAP2Q8WWK9 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC15.45■□□□□ 0.06
CKAP2Q8WWK9 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CKAP2Q8WWK9 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CKAP2Q8WWK9 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms