Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC14.97□□□□□ -0.01
CLHC1Q8NHS4 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLHC1Q8NHS4 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC14.97□□□□□ -0.01
CLHC1Q8NHS4 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CLHC1Q8NHS4 AC097376.2-205ENST00000610159 5334 ntBASIC14.97□□□□□ -0.01
CLHC1Q8NHS4 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
CLHC1Q8NHS4 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
CLHC1Q8NHS4 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CLHC1Q8NHS4 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC14.97□□□□□ -0.01
CLHC1Q8NHS4 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLHC1Q8NHS4 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLHC1Q8NHS4 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CLHC1Q8NHS4 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CLHC1Q8NHS4 AMT-224ENST00000635808 1610 ntTSL 5 BASIC14.97□□□□□ -0.01
CLHC1Q8NHS4 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLHC1Q8NHS4 RPS19-201ENST00000221975 500 ntTSL 3 BASIC14.97□□□□□ -0.01
CLHC1Q8NHS4 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CLHC1Q8NHS4 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CLHC1Q8NHS4 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
CLHC1Q8NHS4 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC14.97□□□□□ -0.01
CLHC1Q8NHS4 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
CLHC1Q8NHS4 COA5-202ENST00000409997 557 ntTSL 4 BASIC14.97□□□□□ -0.01
CLHC1Q8NHS4 BX842568.4-201ENST00000421222 227 ntBASIC14.97□□□□□ -0.01
CLHC1Q8NHS4 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CLHC1Q8NHS4 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC14.97□□□□□ -0.01
CLHC1Q8NHS4 AP000344.2-201ENST00000512987 629 ntBASIC14.97□□□□□ -0.01
CLHC1Q8NHS4 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC14.97□□□□□ -0.01
CLHC1Q8NHS4 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC14.97□□□□□ -0.01
CLHC1Q8NHS4 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC14.97□□□□□ -0.01
CLHC1Q8NHS4 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLHC1Q8NHS4 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLHC1Q8NHS4 MIR3687-2-201ENST00000577708 61 ntBASIC14.97□□□□□ -0.01
CLHC1Q8NHS4 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC14.97□□□□□ -0.01
CLHC1Q8NHS4 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
CLHC1Q8NHS4 MIR3687-1-201ENST00000614492 61 ntBASIC14.97□□□□□ -0.01
CLHC1Q8NHS4 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
CLHC1Q8NHS4 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC14.97□□□□□ -0.01
CLHC1Q8NHS4 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CLHC1Q8NHS4 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CLHC1Q8NHS4 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC14.97□□□□□ -0.01
CLHC1Q8NHS4 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
CLHC1Q8NHS4 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CLHC1Q8NHS4 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLHC1Q8NHS4 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CLHC1Q8NHS4 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLHC1Q8NHS4 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLHC1Q8NHS4 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLHC1Q8NHS4 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLHC1Q8NHS4 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CLHC1Q8NHS4 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC14.97□□□□□ -0.01
CLHC1Q8NHS4 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
CLHC1Q8NHS4 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CLHC1Q8NHS4 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLHC1Q8NHS4 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC14.96□□□□□ -0.01
CLHC1Q8NHS4 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CLHC1Q8NHS4 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CLHC1Q8NHS4 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
CLHC1Q8NHS4 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CLHC1Q8NHS4 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CLHC1Q8NHS4 AL009178.2-201ENST00000597278 2719 ntBASIC14.96□□□□□ -0.01
CLHC1Q8NHS4 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CLHC1Q8NHS4 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC14.96□□□□□ -0.01
CLHC1Q8NHS4 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CLHC1Q8NHS4 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CLHC1Q8NHS4 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CLHC1Q8NHS4 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CLHC1Q8NHS4 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CLHC1Q8NHS4 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC14.96□□□□□ -0.01
CLHC1Q8NHS4 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC14.96□□□□□ -0.01
CLHC1Q8NHS4 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CLHC1Q8NHS4 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC14.96□□□□□ -0.01
CLHC1Q8NHS4 RPSAP43-201ENST00000402237 625 ntBASIC14.96□□□□□ -0.01
CLHC1Q8NHS4 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
CLHC1Q8NHS4 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC14.96□□□□□ -0.01
CLHC1Q8NHS4 COX10-202ENST00000429152 875 ntTSL 2 BASIC14.96□□□□□ -0.01
CLHC1Q8NHS4 TARDBPP1-201ENST00000442013 1203 ntBASIC14.96□□□□□ -0.01
CLHC1Q8NHS4 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CLHC1Q8NHS4 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC14.96□□□□□ -0.01
CLHC1Q8NHS4 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC14.96□□□□□ -0.01
CLHC1Q8NHS4 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC14.96□□□□□ -0.01
CLHC1Q8NHS4 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC14.96□□□□□ -0.01
CLHC1Q8NHS4 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.01
CLHC1Q8NHS4 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CLHC1Q8NHS4 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC14.96□□□□□ -0.01
CLHC1Q8NHS4 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
CLHC1Q8NHS4 AC007967.4-201ENST00000614700 386 ntBASIC14.96□□□□□ -0.01
CLHC1Q8NHS4 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
CLHC1Q8NHS4 AC009093.7-201ENST00000623853 1223 ntBASIC14.96□□□□□ -0.01
CLHC1Q8NHS4 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
CLHC1Q8NHS4 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CLHC1Q8NHS4 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CLHC1Q8NHS4 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CLHC1Q8NHS4 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC14.96□□□□□ -0.01
CLHC1Q8NHS4 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC14.96□□□□□ -0.02
CLHC1Q8NHS4 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
CLHC1Q8NHS4 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
CLHC1Q8NHS4 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
CLHC1Q8NHS4 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
CLHC1Q8NHS4 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
CLHC1Q8NHS4 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms