Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC14.7□□□□□ -0.06
SIMC1Q8NDZ2 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SIMC1Q8NDZ2 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SIMC1Q8NDZ2 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SIMC1Q8NDZ2 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SIMC1Q8NDZ2 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC14.7□□□□□ -0.06
SIMC1Q8NDZ2 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC14.7□□□□□ -0.06
SIMC1Q8NDZ2 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
SIMC1Q8NDZ2 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC14.69□□□□□ -0.06
SIMC1Q8NDZ2 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
SIMC1Q8NDZ2 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
SIMC1Q8NDZ2 AC087481.3-201ENST00000602886 1894 ntBASIC14.69□□□□□ -0.06
SIMC1Q8NDZ2 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SIMC1Q8NDZ2 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC14.69□□□□□ -0.06
SIMC1Q8NDZ2 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SIMC1Q8NDZ2 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SIMC1Q8NDZ2 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
SIMC1Q8NDZ2 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SIMC1Q8NDZ2 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC14.69□□□□□ -0.06
SIMC1Q8NDZ2 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SIMC1Q8NDZ2 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SIMC1Q8NDZ2 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
SIMC1Q8NDZ2 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SIMC1Q8NDZ2 CELP-203ENST00000624767 2414 ntTSL 5 BASIC14.69□□□□□ -0.06
SIMC1Q8NDZ2 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
SIMC1Q8NDZ2 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SIMC1Q8NDZ2 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SIMC1Q8NDZ2 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SIMC1Q8NDZ2 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC14.69□□□□□ -0.06
SIMC1Q8NDZ2 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC14.69□□□□□ -0.06
SIMC1Q8NDZ2 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC14.69□□□□□ -0.06
SIMC1Q8NDZ2 RPL13P2-201ENST00000440687 659 ntBASIC14.69□□□□□ -0.06
SIMC1Q8NDZ2 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC14.69□□□□□ -0.06
SIMC1Q8NDZ2 AL589987.1-201ENST00000453380 819 ntBASIC14.69□□□□□ -0.06
SIMC1Q8NDZ2 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC14.69□□□□□ -0.06
SIMC1Q8NDZ2 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC14.69□□□□□ -0.06
SIMC1Q8NDZ2 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SIMC1Q8NDZ2 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC14.69□□□□□ -0.06
SIMC1Q8NDZ2 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC14.69□□□□□ -0.06
SIMC1Q8NDZ2 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SIMC1Q8NDZ2 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
SIMC1Q8NDZ2 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC14.69□□□□□ -0.06
SIMC1Q8NDZ2 NID2-208ENST00000617139 3827 ntTSL 5 BASIC14.69□□□□□ -0.06
SIMC1Q8NDZ2 RAB34-223ENST00000636154 730 ntTSL 2 BASIC14.69□□□□□ -0.06
SIMC1Q8NDZ2 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SIMC1Q8NDZ2 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC14.69□□□□□ -0.06
SIMC1Q8NDZ2 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
SIMC1Q8NDZ2 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SIMC1Q8NDZ2 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
SIMC1Q8NDZ2 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
SIMC1Q8NDZ2 AC112693.3-201ENST00000624819 1983 ntBASIC14.69□□□□□ -0.06
SIMC1Q8NDZ2 FLJ16779-201ENST00000612722 7638 ntBASIC14.69□□□□□ -0.06
SIMC1Q8NDZ2 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SIMC1Q8NDZ2 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SIMC1Q8NDZ2 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC14.69□□□□□ -0.06
SIMC1Q8NDZ2 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SIMC1Q8NDZ2 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SIMC1Q8NDZ2 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
SIMC1Q8NDZ2 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
SIMC1Q8NDZ2 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SIMC1Q8NDZ2 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SIMC1Q8NDZ2 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
SIMC1Q8NDZ2 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
SIMC1Q8NDZ2 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SIMC1Q8NDZ2 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
SIMC1Q8NDZ2 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SIMC1Q8NDZ2 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SIMC1Q8NDZ2 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SIMC1Q8NDZ2 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC14.68□□□□□ -0.06
SIMC1Q8NDZ2 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
SIMC1Q8NDZ2 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC14.68□□□□□ -0.06
SIMC1Q8NDZ2 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC14.68□□□□□ -0.06
SIMC1Q8NDZ2 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC14.68□□□□□ -0.06
SIMC1Q8NDZ2 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC14.68□□□□□ -0.06
SIMC1Q8NDZ2 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SIMC1Q8NDZ2 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
SIMC1Q8NDZ2 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC14.68□□□□□ -0.06
SIMC1Q8NDZ2 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC14.68□□□□□ -0.06
SIMC1Q8NDZ2 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC14.68□□□□□ -0.06
SIMC1Q8NDZ2 BCRP1-201ENST00000444246 691 ntBASIC14.68□□□□□ -0.06
SIMC1Q8NDZ2 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC14.68□□□□□ -0.06
SIMC1Q8NDZ2 TMPRSS11CP-201ENST00000453277 683 ntBASIC14.68□□□□□ -0.06
SIMC1Q8NDZ2 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SIMC1Q8NDZ2 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC14.68□□□□□ -0.06
SIMC1Q8NDZ2 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC14.68□□□□□ -0.06
SIMC1Q8NDZ2 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC14.68□□□□□ -0.06
SIMC1Q8NDZ2 SSH2-210ENST00000582084 560 ntTSL 3 BASIC14.68□□□□□ -0.06
SIMC1Q8NDZ2 AC004461.2-201ENST00000629517 803 ntBASIC14.68□□□□□ -0.06
SIMC1Q8NDZ2 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
SIMC1Q8NDZ2 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC14.68□□□□□ -0.06
SIMC1Q8NDZ2 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SIMC1Q8NDZ2 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC14.68□□□□□ -0.06
SIMC1Q8NDZ2 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
SIMC1Q8NDZ2 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
SIMC1Q8NDZ2 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SIMC1Q8NDZ2 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC14.68□□□□□ -0.06
SIMC1Q8NDZ2 AC007292.2-201ENST00000593524 1812 ntBASIC14.68□□□□□ -0.06
SIMC1Q8NDZ2 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC14.68□□□□□ -0.06
SIMC1Q8NDZ2 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
SIMC1Q8NDZ2 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms