Protein–RNA interactions for Protein: Q8N6L0

CCDC155, Protein KASH5, humanhuman

Predictions only

Length 562 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC155Q8N6L0 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC155Q8N6L0 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC17.63■□□□□ 0.41
CCDC155Q8N6L0 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC155Q8N6L0 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC17.62■□□□□ 0.41
CCDC155Q8N6L0 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC155Q8N6L0 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC17.62■□□□□ 0.41
CCDC155Q8N6L0 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC155Q8N6L0 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC155Q8N6L0 CICP13-201ENST00000422015 2789 ntBASIC17.62■□□□□ 0.41
CCDC155Q8N6L0 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC17.62■□□□□ 0.41
CCDC155Q8N6L0 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
CCDC155Q8N6L0 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC155Q8N6L0 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC155Q8N6L0 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
CCDC155Q8N6L0 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC155Q8N6L0 HAUS4P1-201ENST00000406739 1145 ntBASIC17.62■□□□□ 0.41
CCDC155Q8N6L0 AC245100.5-201ENST00000452108 331 ntBASIC17.62■□□□□ 0.41
CCDC155Q8N6L0 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC17.62■□□□□ 0.41
CCDC155Q8N6L0 CROCCP4-201ENST00000457096 498 ntBASIC17.62■□□□□ 0.41
CCDC155Q8N6L0 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC17.62■□□□□ 0.41
CCDC155Q8N6L0 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC17.62■□□□□ 0.41
CCDC155Q8N6L0 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC17.62■□□□□ 0.41
CCDC155Q8N6L0 USP32P1-208ENST00000506594 1164 ntBASIC17.62■□□□□ 0.41
CCDC155Q8N6L0 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC17.62■□□□□ 0.41
CCDC155Q8N6L0 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC17.62■□□□□ 0.41
CCDC155Q8N6L0 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC17.62■□□□□ 0.41
CCDC155Q8N6L0 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC17.62■□□□□ 0.41
CCDC155Q8N6L0 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC17.62■□□□□ 0.41
CCDC155Q8N6L0 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC155Q8N6L0 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC155Q8N6L0 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC17.62■□□□□ 0.41
CCDC155Q8N6L0 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC17.62■□□□□ 0.41
CCDC155Q8N6L0 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
CCDC155Q8N6L0 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
CCDC155Q8N6L0 AC018665.1-201ENST00000622927 1362 ntBASIC17.62■□□□□ 0.41
CCDC155Q8N6L0 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC155Q8N6L0 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC155Q8N6L0 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC155Q8N6L0 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC17.62■□□□□ 0.41
CCDC155Q8N6L0 AC134407.2-201ENST00000625089 1978 ntBASIC17.62■□□□□ 0.41
CCDC155Q8N6L0 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC155Q8N6L0 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC155Q8N6L0 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
CCDC155Q8N6L0 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
CCDC155Q8N6L0 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC17.62■□□□□ 0.41
CCDC155Q8N6L0 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
CCDC155Q8N6L0 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
CCDC155Q8N6L0 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC17.62■□□□□ 0.41
CCDC155Q8N6L0 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
CCDC155Q8N6L0 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC17.61■□□□□ 0.41
CCDC155Q8N6L0 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC155Q8N6L0 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC17.61■□□□□ 0.41
CCDC155Q8N6L0 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC17.61■□□□□ 0.41
CCDC155Q8N6L0 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
CCDC155Q8N6L0 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC155Q8N6L0 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC155Q8N6L0 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC155Q8N6L0 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC155Q8N6L0 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC155Q8N6L0 AC068418.2-201ENST00000577309 3703 ntBASIC17.61■□□□□ 0.41
CCDC155Q8N6L0 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC155Q8N6L0 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC155Q8N6L0 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
CCDC155Q8N6L0 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC155Q8N6L0 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
CCDC155Q8N6L0 APOA1-205ENST00000375329 927 ntTSL 2 BASIC17.61■□□□□ 0.41
CCDC155Q8N6L0 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC17.61■□□□□ 0.41
CCDC155Q8N6L0 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
CCDC155Q8N6L0 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC17.61■□□□□ 0.41
CCDC155Q8N6L0 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
CCDC155Q8N6L0 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC17.61■□□□□ 0.41
CCDC155Q8N6L0 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC17.61■□□□□ 0.41
CCDC155Q8N6L0 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC155Q8N6L0 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC17.61■□□□□ 0.41
CCDC155Q8N6L0 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC17.61■□□□□ 0.41
CCDC155Q8N6L0 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC17.61■□□□□ 0.41
CCDC155Q8N6L0 MIR4525-201ENST00000580000 75 ntBASIC17.61■□□□□ 0.41
CCDC155Q8N6L0 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC155Q8N6L0 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC17.61■□□□□ 0.41
CCDC155Q8N6L0 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC17.61■□□□□ 0.41
CCDC155Q8N6L0 AL158212.4-201ENST00000624062 1286 ntBASIC17.61■□□□□ 0.41
CCDC155Q8N6L0 CU634019.7-201ENST00000624153 1185 ntBASIC17.61■□□□□ 0.41
CCDC155Q8N6L0 FP236241.2-201ENST00000624906 1185 ntBASIC17.61■□□□□ 0.41
CCDC155Q8N6L0 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC17.61■□□□□ 0.41
CCDC155Q8N6L0 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC155Q8N6L0 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC155Q8N6L0 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC155Q8N6L0 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC17.61■□□□□ 0.41
CCDC155Q8N6L0 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC155Q8N6L0 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC155Q8N6L0 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC17.61■□□□□ 0.41
CCDC155Q8N6L0 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC155Q8N6L0 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC155Q8N6L0 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC155Q8N6L0 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC17.61■□□□□ 0.41
CCDC155Q8N6L0 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC155Q8N6L0 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC155Q8N6L0 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC155Q8N6L0 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
CCDC155Q8N6L0 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms