Protein–RNA interactions for Protein: Q8N5U0

C11orf42, Uncharacterized protein C11orf42, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf42Q8N5U0 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC13.02□□□□□ -0.32
C11orf42Q8N5U0 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.32
C11orf42Q8N5U0 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC13.02□□□□□ -0.32
C11orf42Q8N5U0 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC13.02□□□□□ -0.32
C11orf42Q8N5U0 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
C11orf42Q8N5U0 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
C11orf42Q8N5U0 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC13.02□□□□□ -0.32
C11orf42Q8N5U0 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC13.02□□□□□ -0.32
C11orf42Q8N5U0 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.32
C11orf42Q8N5U0 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC13.02□□□□□ -0.33
C11orf42Q8N5U0 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
C11orf42Q8N5U0 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
C11orf42Q8N5U0 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
C11orf42Q8N5U0 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
C11orf42Q8N5U0 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
C11orf42Q8N5U0 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
C11orf42Q8N5U0 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC13.02□□□□□ -0.33
C11orf42Q8N5U0 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
C11orf42Q8N5U0 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
C11orf42Q8N5U0 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
C11orf42Q8N5U0 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
C11orf42Q8N5U0 AC114501.2-201ENST00000439631 535 ntBASIC13.02□□□□□ -0.33
C11orf42Q8N5U0 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC13.02□□□□□ -0.33
C11orf42Q8N5U0 BCRP1-201ENST00000444246 691 ntBASIC13.02□□□□□ -0.33
C11orf42Q8N5U0 AL512638.1-201ENST00000457493 794 ntBASIC13.02□□□□□ -0.33
C11orf42Q8N5U0 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC13.02□□□□□ -0.33
C11orf42Q8N5U0 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC13.02□□□□□ -0.33
C11orf42Q8N5U0 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC13.02□□□□□ -0.33
C11orf42Q8N5U0 SDHAP3-202ENST00000515467 728 ntBASIC13.02□□□□□ -0.33
C11orf42Q8N5U0 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC13.02□□□□□ -0.33
C11orf42Q8N5U0 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC13.02□□□□□ -0.33
C11orf42Q8N5U0 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
C11orf42Q8N5U0 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC13.02□□□□□ -0.33
C11orf42Q8N5U0 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
C11orf42Q8N5U0 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC13.02□□□□□ -0.33
C11orf42Q8N5U0 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC13.02□□□□□ -0.33
C11orf42Q8N5U0 NAA60-208ENST00000570819 833 ntTSL 2 BASIC13.02□□□□□ -0.33
C11orf42Q8N5U0 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
C11orf42Q8N5U0 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
C11orf42Q8N5U0 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC13.02□□□□□ -0.33
C11orf42Q8N5U0 AC004840.1-201ENST00000636359 365 ntBASIC13.02□□□□□ -0.33
C11orf42Q8N5U0 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
C11orf42Q8N5U0 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC13.02□□□□□ -0.33
C11orf42Q8N5U0 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
C11orf42Q8N5U0 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
C11orf42Q8N5U0 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC13.02□□□□□ -0.33
C11orf42Q8N5U0 AP002414.2-201ENST00000591780 3365 ntBASIC13.02□□□□□ -0.33
C11orf42Q8N5U0 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
C11orf42Q8N5U0 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
C11orf42Q8N5U0 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
C11orf42Q8N5U0 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC13.02□□□□□ -0.33
C11orf42Q8N5U0 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
C11orf42Q8N5U0 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
C11orf42Q8N5U0 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC13.02□□□□□ -0.33
C11orf42Q8N5U0 AL607033.1-201ENST00000623900 1599 ntBASIC13.02□□□□□ -0.33
C11orf42Q8N5U0 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
C11orf42Q8N5U0 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC13.02□□□□□ -0.33
C11orf42Q8N5U0 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
C11orf42Q8N5U0 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC13.01□□□□□ -0.33
C11orf42Q8N5U0 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
C11orf42Q8N5U0 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
C11orf42Q8N5U0 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
C11orf42Q8N5U0 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
C11orf42Q8N5U0 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
C11orf42Q8N5U0 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
C11orf42Q8N5U0 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
C11orf42Q8N5U0 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
C11orf42Q8N5U0 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
C11orf42Q8N5U0 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC13.01□□□□□ -0.33
C11orf42Q8N5U0 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
C11orf42Q8N5U0 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
C11orf42Q8N5U0 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
C11orf42Q8N5U0 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
C11orf42Q8N5U0 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
C11orf42Q8N5U0 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
C11orf42Q8N5U0 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
C11orf42Q8N5U0 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
C11orf42Q8N5U0 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC13.01□□□□□ -0.33
C11orf42Q8N5U0 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC13.01□□□□□ -0.33
C11orf42Q8N5U0 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
C11orf42Q8N5U0 INGX-202ENST00000489074 768 ntBASIC13.01□□□□□ -0.33
C11orf42Q8N5U0 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC13.01□□□□□ -0.33
C11orf42Q8N5U0 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC13.01□□□□□ -0.33
C11orf42Q8N5U0 AJ011932.1-201ENST00000621707 465 ntBASIC13.01□□□□□ -0.33
C11orf42Q8N5U0 AL109936.8-201ENST00000641772 604 ntBASIC13.01□□□□□ -0.33
C11orf42Q8N5U0 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC13.01□□□□□ -0.33
C11orf42Q8N5U0 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
C11orf42Q8N5U0 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
C11orf42Q8N5U0 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
C11orf42Q8N5U0 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
C11orf42Q8N5U0 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
C11orf42Q8N5U0 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
C11orf42Q8N5U0 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC13.01□□□□□ -0.33
C11orf42Q8N5U0 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC13.01□□□□□ -0.33
C11orf42Q8N5U0 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC13.01□□□□□ -0.33
C11orf42Q8N5U0 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC13.01□□□□□ -0.33
C11orf42Q8N5U0 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC13.01□□□□□ -0.33
C11orf42Q8N5U0 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
C11orf42Q8N5U0 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC13.01□□□□□ -0.33
C11orf42Q8N5U0 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms