Protein–RNA interactions for Protein: Q86YS3

RAB11FIP4, Rab11 family-interacting protein 4, humanhuman

Predictions only

Length 637 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP4Q86YS3 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
RAB11FIP4Q86YS3 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RAB11FIP4Q86YS3 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RAB11FIP4Q86YS3 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RAB11FIP4Q86YS3 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RAB11FIP4Q86YS3 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RAB11FIP4Q86YS3 AC022532.1-201ENST00000624563 1728 ntBASIC18.23■□□□□ 0.51
RAB11FIP4Q86YS3 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RAB11FIP4Q86YS3 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC18.23■□□□□ 0.51
RAB11FIP4Q86YS3 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC18.23■□□□□ 0.51
RAB11FIP4Q86YS3 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RAB11FIP4Q86YS3 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
RAB11FIP4Q86YS3 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC18.23■□□□□ 0.51
RAB11FIP4Q86YS3 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
RAB11FIP4Q86YS3 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RAB11FIP4Q86YS3 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RAB11FIP4Q86YS3 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RAB11FIP4Q86YS3 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RAB11FIP4Q86YS3 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RAB11FIP4Q86YS3 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
RAB11FIP4Q86YS3 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC18.22■□□□□ 0.51
RAB11FIP4Q86YS3 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
RAB11FIP4Q86YS3 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RAB11FIP4Q86YS3 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RAB11FIP4Q86YS3 RERG-209ENST00000546331 1383 ntTSL 2 BASIC18.22■□□□□ 0.51
RAB11FIP4Q86YS3 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC18.22■□□□□ 0.51
RAB11FIP4Q86YS3 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC18.22■□□□□ 0.51
RAB11FIP4Q86YS3 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RAB11FIP4Q86YS3 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RAB11FIP4Q86YS3 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RAB11FIP4Q86YS3 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC18.22■□□□□ 0.51
RAB11FIP4Q86YS3 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
RAB11FIP4Q86YS3 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC18.22■□□□□ 0.51
RAB11FIP4Q86YS3 OARD1-208ENST00000469104 704 ntTSL 2 BASIC18.22■□□□□ 0.51
RAB11FIP4Q86YS3 KRT18P43-201ENST00000469825 1281 ntBASIC18.22■□□□□ 0.51
RAB11FIP4Q86YS3 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC18.22■□□□□ 0.51
RAB11FIP4Q86YS3 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC18.22■□□□□ 0.51
RAB11FIP4Q86YS3 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RAB11FIP4Q86YS3 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC18.22■□□□□ 0.51
RAB11FIP4Q86YS3 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC18.22■□□□□ 0.51
RAB11FIP4Q86YS3 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC18.22■□□□□ 0.51
RAB11FIP4Q86YS3 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC18.22■□□□□ 0.51
RAB11FIP4Q86YS3 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RAB11FIP4Q86YS3 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC18.22■□□□□ 0.51
RAB11FIP4Q86YS3 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RAB11FIP4Q86YS3 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RAB11FIP4Q86YS3 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RAB11FIP4Q86YS3 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
RAB11FIP4Q86YS3 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RAB11FIP4Q86YS3 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
RAB11FIP4Q86YS3 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC18.22■□□□□ 0.51
RAB11FIP4Q86YS3 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
RAB11FIP4Q86YS3 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RAB11FIP4Q86YS3 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RAB11FIP4Q86YS3 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RAB11FIP4Q86YS3 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC18.21■□□□□ 0.51
RAB11FIP4Q86YS3 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
RAB11FIP4Q86YS3 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RAB11FIP4Q86YS3 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RAB11FIP4Q86YS3 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
RAB11FIP4Q86YS3 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
RAB11FIP4Q86YS3 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
RAB11FIP4Q86YS3 POLL-217ENST00000628479 1953 ntTSL 5 BASIC18.21■□□□□ 0.51
RAB11FIP4Q86YS3 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
RAB11FIP4Q86YS3 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
RAB11FIP4Q86YS3 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RAB11FIP4Q86YS3 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
RAB11FIP4Q86YS3 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
RAB11FIP4Q86YS3 WASH4P-201ENST00000564273 1246 ntBASIC18.21■□□□□ 0.51
RAB11FIP4Q86YS3 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC18.21■□□□□ 0.51
RAB11FIP4Q86YS3 AC009118.2-201ENST00000613275 655 ntBASIC18.21■□□□□ 0.51
RAB11FIP4Q86YS3 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
RAB11FIP4Q86YS3 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RAB11FIP4Q86YS3 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
RAB11FIP4Q86YS3 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC18.21■□□□□ 0.51
RAB11FIP4Q86YS3 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
RAB11FIP4Q86YS3 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC18.21■□□□□ 0.51
RAB11FIP4Q86YS3 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
RAB11FIP4Q86YS3 AC006486.2-201ENST00000624246 2199 ntBASIC18.21■□□□□ 0.51
RAB11FIP4Q86YS3 MECR-202ENST00000373791 2416 ntTSL 2 BASIC18.21■□□□□ 0.51
RAB11FIP4Q86YS3 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RAB11FIP4Q86YS3 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RAB11FIP4Q86YS3 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
RAB11FIP4Q86YS3 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC18.21■□□□□ 0.5
RAB11FIP4Q86YS3 AC138969.3-201ENST00000546612 1459 ntBASIC18.2■□□□□ 0.5
RAB11FIP4Q86YS3 AC138932.2-201ENST00000548268 1459 ntBASIC18.2■□□□□ 0.5
RAB11FIP4Q86YS3 AC126755.4-201ENST00000549796 1459 ntBASIC18.2■□□□□ 0.5
RAB11FIP4Q86YS3 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC18.2■□□□□ 0.5
RAB11FIP4Q86YS3 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
RAB11FIP4Q86YS3 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RAB11FIP4Q86YS3 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
RAB11FIP4Q86YS3 AC148477.4-201ENST00000613430 1793 ntBASIC18.2■□□□□ 0.5
RAB11FIP4Q86YS3 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
RAB11FIP4Q86YS3 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RAB11FIP4Q86YS3 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
RAB11FIP4Q86YS3 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RAB11FIP4Q86YS3 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
RAB11FIP4Q86YS3 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RAB11FIP4Q86YS3 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC18.2■□□□□ 0.5
RAB11FIP4Q86YS3 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms