Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC17.26■□□□□ 0.35
TRIM50Q86XT4 AC025279.2-201ENST00000569730 653 ntBASIC17.26■□□□□ 0.35
TRIM50Q86XT4 AP005019.2-201ENST00000615104 511 ntBASIC17.26■□□□□ 0.35
TRIM50Q86XT4 AC145423.3-201ENST00000615987 467 ntBASIC17.26■□□□□ 0.35
TRIM50Q86XT4 AL354718.3-201ENST00000616414 581 ntBASIC17.26■□□□□ 0.35
TRIM50Q86XT4 BX539320.1-201ENST00000623759 877 ntBASIC17.26■□□□□ 0.35
TRIM50Q86XT4 CR382287.1-201ENST00000623954 586 ntBASIC17.26■□□□□ 0.35
TRIM50Q86XT4 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM50Q86XT4 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM50Q86XT4 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM50Q86XT4 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM50Q86XT4 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC17.26■□□□□ 0.35
TRIM50Q86XT4 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC17.26■□□□□ 0.35
TRIM50Q86XT4 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM50Q86XT4 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC17.26■□□□□ 0.35
TRIM50Q86XT4 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
TRIM50Q86XT4 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM50Q86XT4 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
TRIM50Q86XT4 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
TRIM50Q86XT4 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM50Q86XT4 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM50Q86XT4 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM50Q86XT4 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM50Q86XT4 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM50Q86XT4 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC17.26■□□□□ 0.35
TRIM50Q86XT4 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM50Q86XT4 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM50Q86XT4 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM50Q86XT4 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM50Q86XT4 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM50Q86XT4 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM50Q86XT4 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM50Q86XT4 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM50Q86XT4 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM50Q86XT4 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC17.25■□□□□ 0.35
TRIM50Q86XT4 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC17.25■□□□□ 0.35
TRIM50Q86XT4 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM50Q86XT4 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM50Q86XT4 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM50Q86XT4 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC17.25■□□□□ 0.35
TRIM50Q86XT4 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM50Q86XT4 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM50Q86XT4 ACTBP11-201ENST00000436287 1126 ntBASIC17.25■□□□□ 0.35
TRIM50Q86XT4 AL590640.2-201ENST00000457038 527 ntBASIC17.25■□□□□ 0.35
TRIM50Q86XT4 MIR4525-201ENST00000580000 75 ntBASIC17.25■□□□□ 0.35
TRIM50Q86XT4 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC17.25■□□□□ 0.35
TRIM50Q86XT4 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM50Q86XT4 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM50Q86XT4 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM50Q86XT4 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC17.25■□□□□ 0.35
TRIM50Q86XT4 HYMAI-201ENST00000635591 3347 ntBASIC17.25■□□□□ 0.35
TRIM50Q86XT4 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM50Q86XT4 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC17.25■□□□□ 0.35
TRIM50Q86XT4 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM50Q86XT4 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM50Q86XT4 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM50Q86XT4 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC17.24■□□□□ 0.35
TRIM50Q86XT4 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
TRIM50Q86XT4 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM50Q86XT4 KRT8P35-201ENST00000483942 1338 ntBASIC17.24■□□□□ 0.35
TRIM50Q86XT4 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM50Q86XT4 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM50Q86XT4 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
TRIM50Q86XT4 CICP6-201ENST00000457191 2729 ntBASIC17.24■□□□□ 0.35
TRIM50Q86XT4 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
TRIM50Q86XT4 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM50Q86XT4 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC17.24■□□□□ 0.35
TRIM50Q86XT4 AL138709.1-201ENST00000614840 1693 ntBASIC17.24■□□□□ 0.35
TRIM50Q86XT4 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC17.24■□□□□ 0.35
TRIM50Q86XT4 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
TRIM50Q86XT4 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC17.24■□□□□ 0.35
TRIM50Q86XT4 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM50Q86XT4 FAM21FP-201ENST00000426241 1131 ntBASIC17.24■□□□□ 0.35
TRIM50Q86XT4 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC17.24■□□□□ 0.35
TRIM50Q86XT4 OLR1-203ENST00000432556 950 ntTSL 2 BASIC17.24■□□□□ 0.35
TRIM50Q86XT4 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC17.24■□□□□ 0.35
TRIM50Q86XT4 PFN2-205ENST00000461868 613 ntTSL 2 BASIC17.24■□□□□ 0.35
TRIM50Q86XT4 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM50Q86XT4 KRT18P25-201ENST00000508931 1278 ntBASIC17.24■□□□□ 0.35
TRIM50Q86XT4 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC17.24■□□□□ 0.35
TRIM50Q86XT4 RNA5SP412-201ENST00000516234 123 ntBASIC17.24■□□□□ 0.35
TRIM50Q86XT4 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC17.24■□□□□ 0.35
TRIM50Q86XT4 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM50Q86XT4 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC17.24■□□□□ 0.35
TRIM50Q86XT4 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM50Q86XT4 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC17.24■□□□□ 0.35
TRIM50Q86XT4 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC17.24■□□□□ 0.35
TRIM50Q86XT4 RHOXF1P1-202ENST00000635473 501 ntBASIC17.24■□□□□ 0.35
TRIM50Q86XT4 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC17.24■□□□□ 0.35
TRIM50Q86XT4 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM50Q86XT4 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM50Q86XT4 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
TRIM50Q86XT4 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM50Q86XT4 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM50Q86XT4 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM50Q86XT4 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
TRIM50Q86XT4 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC17.24■□□□□ 0.35
TRIM50Q86XT4 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM50Q86XT4 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM50Q86XT4 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 70.4 ms