Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC13.9□□□□□ -0.18
LRRC28Q86X40 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC13.9□□□□□ -0.18
LRRC28Q86X40 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
LRRC28Q86X40 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
LRRC28Q86X40 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
LRRC28Q86X40 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
LRRC28Q86X40 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC13.9□□□□□ -0.18
LRRC28Q86X40 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
LRRC28Q86X40 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC13.9□□□□□ -0.18
LRRC28Q86X40 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC13.9□□□□□ -0.18
LRRC28Q86X40 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LRRC28Q86X40 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC13.9□□□□□ -0.18
LRRC28Q86X40 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
LRRC28Q86X40 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LRRC28Q86X40 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
LRRC28Q86X40 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC13.9□□□□□ -0.18
LRRC28Q86X40 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC13.9□□□□□ -0.18
LRRC28Q86X40 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LRRC28Q86X40 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LRRC28Q86X40 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LRRC28Q86X40 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LRRC28Q86X40 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC13.9□□□□□ -0.18
LRRC28Q86X40 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC13.9□□□□□ -0.18
LRRC28Q86X40 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
LRRC28Q86X40 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
LRRC28Q86X40 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
LRRC28Q86X40 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
LRRC28Q86X40 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
LRRC28Q86X40 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC13.89□□□□□ -0.19
LRRC28Q86X40 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
LRRC28Q86X40 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
LRRC28Q86X40 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LRRC28Q86X40 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LRRC28Q86X40 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC13.89□□□□□ -0.19
LRRC28Q86X40 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
LRRC28Q86X40 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
LRRC28Q86X40 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
LRRC28Q86X40 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC13.89□□□□□ -0.19
LRRC28Q86X40 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LRRC28Q86X40 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LRRC28Q86X40 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC13.89□□□□□ -0.19
LRRC28Q86X40 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LRRC28Q86X40 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC13.89□□□□□ -0.19
LRRC28Q86X40 AL627223.1-201ENST00000416693 442 ntBASIC13.89□□□□□ -0.19
LRRC28Q86X40 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC13.89□□□□□ -0.19
LRRC28Q86X40 PMS2P2-201ENST00000425039 1128 ntBASIC13.89□□□□□ -0.19
LRRC28Q86X40 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC13.89□□□□□ -0.19
LRRC28Q86X40 SPCS2P4-201ENST00000436160 681 ntBASIC13.89□□□□□ -0.19
LRRC28Q86X40 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LRRC28Q86X40 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
LRRC28Q86X40 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC13.89□□□□□ -0.19
LRRC28Q86X40 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC13.89□□□□□ -0.19
LRRC28Q86X40 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC13.89□□□□□ -0.19
LRRC28Q86X40 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC13.89□□□□□ -0.19
LRRC28Q86X40 LINC01225-203ENST00000563550 1244 ntBASIC13.89□□□□□ -0.19
LRRC28Q86X40 AC027612.4-201ENST00000605371 583 ntBASIC13.89□□□□□ -0.19
LRRC28Q86X40 AC008267.7-201ENST00000624570 1194 ntBASIC13.89□□□□□ -0.19
LRRC28Q86X40 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LRRC28Q86X40 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LRRC28Q86X40 ZBED1P1-201ENST00000502364 1930 ntBASIC13.89□□□□□ -0.19
LRRC28Q86X40 ARHGAP23P1-201ENST00000562773 1937 ntBASIC13.89□□□□□ -0.19
LRRC28Q86X40 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LRRC28Q86X40 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
LRRC28Q86X40 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LRRC28Q86X40 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
LRRC28Q86X40 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LRRC28Q86X40 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC13.89□□□□□ -0.19
LRRC28Q86X40 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
LRRC28Q86X40 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
LRRC28Q86X40 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
LRRC28Q86X40 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LRRC28Q86X40 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC13.89□□□□□ -0.19
LRRC28Q86X40 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
LRRC28Q86X40 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
LRRC28Q86X40 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
LRRC28Q86X40 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC13.89□□□□□ -0.19
LRRC28Q86X40 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LRRC28Q86X40 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LRRC28Q86X40 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
LRRC28Q86X40 STK33-217ENST00000534493 1895 ntTSL 2 BASIC13.89□□□□□ -0.19
LRRC28Q86X40 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC13.89□□□□□ -0.19
LRRC28Q86X40 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LRRC28Q86X40 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
LRRC28Q86X40 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
LRRC28Q86X40 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
LRRC28Q86X40 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
LRRC28Q86X40 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC13.88□□□□□ -0.19
LRRC28Q86X40 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC13.88□□□□□ -0.19
LRRC28Q86X40 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LRRC28Q86X40 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
LRRC28Q86X40 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC13.88□□□□□ -0.19
LRRC28Q86X40 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
LRRC28Q86X40 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LRRC28Q86X40 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
LRRC28Q86X40 GOLGA6L17P-202ENST00000614358 1398 ntBASIC13.88□□□□□ -0.19
LRRC28Q86X40 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC13.88□□□□□ -0.19
LRRC28Q86X40 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LRRC28Q86X40 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC13.88□□□□□ -0.19
LRRC28Q86X40 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LRRC28Q86X40 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms