Protein–RNA interactions for Protein: Q6NT52

CGB2, Choriogonadotropin subunit beta variant 2, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGB2Q6NT52 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CGB2Q6NT52 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CGB2Q6NT52 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
CGB2Q6NT52 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
CGB2Q6NT52 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CGB2Q6NT52 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC15.19■□□□□ 0.02
CGB2Q6NT52 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC15.19■□□□□ 0.02
CGB2Q6NT52 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
CGB2Q6NT52 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CGB2Q6NT52 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
CGB2Q6NT52 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
CGB2Q6NT52 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CGB2Q6NT52 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CGB2Q6NT52 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC15.19■□□□□ 0.02
CGB2Q6NT52 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC15.19■□□□□ 0.02
CGB2Q6NT52 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC15.19■□□□□ 0.02
CGB2Q6NT52 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC15.19■□□□□ 0.02
CGB2Q6NT52 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CGB2Q6NT52 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CGB2Q6NT52 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CGB2Q6NT52 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC15.18■□□□□ 0.02
CGB2Q6NT52 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
CGB2Q6NT52 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
CGB2Q6NT52 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
CGB2Q6NT52 AC016397.2-201ENST00000624848 1985 ntBASIC15.18■□□□□ 0.02
CGB2Q6NT52 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC15.18■□□□□ 0.02
CGB2Q6NT52 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CGB2Q6NT52 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CGB2Q6NT52 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC15.18■□□□□ 0.02
CGB2Q6NT52 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CGB2Q6NT52 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CGB2Q6NT52 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC15.18■□□□□ 0.02
CGB2Q6NT52 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CGB2Q6NT52 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC15.18■□□□□ 0.02
CGB2Q6NT52 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
CGB2Q6NT52 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC15.18■□□□□ 0.02
CGB2Q6NT52 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC15.18■□□□□ 0.02
CGB2Q6NT52 SLC4A1APP2-201ENST00000424054 1259 ntBASIC15.18■□□□□ 0.02
CGB2Q6NT52 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC15.18■□□□□ 0.02
CGB2Q6NT52 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CGB2Q6NT52 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC15.18■□□□□ 0.02
CGB2Q6NT52 KRT18P21-201ENST00000515767 1272 ntBASIC15.18■□□□□ 0.02
CGB2Q6NT52 RNA5SP410-201ENST00000516285 106 ntBASIC15.18■□□□□ 0.02
CGB2Q6NT52 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC15.18■□□□□ 0.02
CGB2Q6NT52 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC15.18■□□□□ 0.02
CGB2Q6NT52 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC15.18■□□□□ 0.02
CGB2Q6NT52 AC023141.13-201ENST00000604991 943 ntBASIC15.18■□□□□ 0.02
CGB2Q6NT52 MED16-214ENST00000617672 554 ntTSL 5 BASIC15.18■□□□□ 0.02
CGB2Q6NT52 AQP6-205ENST00000618286 829 ntTSL 5 BASIC15.18■□□□□ 0.02
CGB2Q6NT52 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC15.18■□□□□ 0.02
CGB2Q6NT52 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC15.18■□□□□ 0.02
CGB2Q6NT52 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CGB2Q6NT52 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC15.18■□□□□ 0.02
CGB2Q6NT52 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CGB2Q6NT52 MX1-218ENST00000619682 1980 ntTSL 5 BASIC15.18■□□□□ 0.02
CGB2Q6NT52 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CGB2Q6NT52 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC15.18■□□□□ 0.02
CGB2Q6NT52 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC15.18■□□□□ 0.02
CGB2Q6NT52 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
CGB2Q6NT52 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
CGB2Q6NT52 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
CGB2Q6NT52 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
CGB2Q6NT52 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
CGB2Q6NT52 BSG-215ENST00000618006 1329 ntTSL 2 BASIC15.17■□□□□ 0.02
CGB2Q6NT52 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC15.17■□□□□ 0.02
CGB2Q6NT52 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CGB2Q6NT52 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
CGB2Q6NT52 AC063926.3-201ENST00000624734 5658 ntBASIC15.17■□□□□ 0.02
CGB2Q6NT52 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
CGB2Q6NT52 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CGB2Q6NT52 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CGB2Q6NT52 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
CGB2Q6NT52 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CGB2Q6NT52 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC15.17■□□□□ 0.02
CGB2Q6NT52 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC15.17■□□□□ 0.02
CGB2Q6NT52 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CGB2Q6NT52 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CGB2Q6NT52 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC15.17■□□□□ 0.02
CGB2Q6NT52 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CGB2Q6NT52 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CGB2Q6NT52 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
CGB2Q6NT52 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC15.17■□□□□ 0.02
CGB2Q6NT52 AC009947.1-201ENST00000444350 727 ntBASIC15.17■□□□□ 0.02
CGB2Q6NT52 AL139010.1-201ENST00000454878 894 ntBASIC15.17■□□□□ 0.02
CGB2Q6NT52 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC15.17■□□□□ 0.02
CGB2Q6NT52 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC15.17■□□□□ 0.02
CGB2Q6NT52 TCAP-202ENST00000578283 583 ntTSL 5 BASIC15.17■□□□□ 0.02
CGB2Q6NT52 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC15.17■□□□□ 0.02
CGB2Q6NT52 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CGB2Q6NT52 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CGB2Q6NT52 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CGB2Q6NT52 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
CGB2Q6NT52 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CGB2Q6NT52 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CGB2Q6NT52 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
CGB2Q6NT52 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CGB2Q6NT52 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
CGB2Q6NT52 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC15.17■□□□□ 0.02
CGB2Q6NT52 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CGB2Q6NT52 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 60.8 ms