Protein–RNA interactions for Protein: Q5VV42

CDKAL1, Threonylcarbamoyladenosine tRNA methylthiotransferase, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1Q5VV42 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CDKAL1Q5VV42 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDKAL1Q5VV42 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CDKAL1Q5VV42 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CDKAL1Q5VV42 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC16.94■□□□□ 0.3
CDKAL1Q5VV42 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDKAL1Q5VV42 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
CDKAL1Q5VV42 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDKAL1Q5VV42 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDKAL1Q5VV42 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
CDKAL1Q5VV42 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC16.94■□□□□ 0.3
CDKAL1Q5VV42 AC113367.3-201ENST00000508316 1912 ntBASIC16.94■□□□□ 0.3
CDKAL1Q5VV42 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CDKAL1Q5VV42 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDKAL1Q5VV42 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDKAL1Q5VV42 AC139749.1-202ENST00000617529 3139 ntBASIC16.94■□□□□ 0.3
CDKAL1Q5VV42 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDKAL1Q5VV42 HLA-V-204ENST00000476601 1289 ntBASIC16.94■□□□□ 0.3
CDKAL1Q5VV42 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
CDKAL1Q5VV42 AC010336.2-201ENST00000564226 506 ntBASIC16.94■□□□□ 0.3
CDKAL1Q5VV42 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDKAL1Q5VV42 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CDKAL1Q5VV42 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDKAL1Q5VV42 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
CDKAL1Q5VV42 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.94■□□□□ 0.3
CDKAL1Q5VV42 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDKAL1Q5VV42 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CDKAL1Q5VV42 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CDKAL1Q5VV42 MPI-203ENST00000535694 1523 ntTSL 2 BASIC16.94■□□□□ 0.3
CDKAL1Q5VV42 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CDKAL1Q5VV42 AC097359.2-201ENST00000604992 2389 ntBASIC16.94■□□□□ 0.3
CDKAL1Q5VV42 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDKAL1Q5VV42 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDKAL1Q5VV42 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
CDKAL1Q5VV42 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
CDKAL1Q5VV42 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC16.94■□□□□ 0.3
CDKAL1Q5VV42 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDKAL1Q5VV42 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC16.94■□□□□ 0.3
CDKAL1Q5VV42 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDKAL1Q5VV42 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CDKAL1Q5VV42 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC16.93■□□□□ 0.3
CDKAL1Q5VV42 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC16.93■□□□□ 0.3
CDKAL1Q5VV42 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC16.93■□□□□ 0.3
CDKAL1Q5VV42 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
CDKAL1Q5VV42 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CDKAL1Q5VV42 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDKAL1Q5VV42 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
CDKAL1Q5VV42 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDKAL1Q5VV42 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDKAL1Q5VV42 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDKAL1Q5VV42 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
CDKAL1Q5VV42 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC16.93■□□□□ 0.3
CDKAL1Q5VV42 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC16.93■□□□□ 0.3
CDKAL1Q5VV42 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDKAL1Q5VV42 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDKAL1Q5VV42 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
CDKAL1Q5VV42 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
CDKAL1Q5VV42 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDKAL1Q5VV42 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
CDKAL1Q5VV42 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
CDKAL1Q5VV42 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC16.93■□□□□ 0.3
CDKAL1Q5VV42 AC074044.1-201ENST00000609673 707 ntBASIC16.93■□□□□ 0.3
CDKAL1Q5VV42 TEX28P1-201ENST00000613479 1221 ntBASIC16.93■□□□□ 0.3
CDKAL1Q5VV42 TEX28P2-201ENST00000617764 1221 ntBASIC16.93■□□□□ 0.3
CDKAL1Q5VV42 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC16.93■□□□□ 0.3
CDKAL1Q5VV42 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC16.93■□□□□ 0.3
CDKAL1Q5VV42 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDKAL1Q5VV42 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
CDKAL1Q5VV42 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDKAL1Q5VV42 AC007787.1-201ENST00000588095 1583 ntBASIC16.93■□□□□ 0.3
CDKAL1Q5VV42 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CDKAL1Q5VV42 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDKAL1Q5VV42 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDKAL1Q5VV42 FES-203ENST00000394302 2133 ntTSL 5 BASIC16.93■□□□□ 0.3
CDKAL1Q5VV42 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDKAL1Q5VV42 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDKAL1Q5VV42 AP001267.2-201ENST00000532619 2086 ntBASIC16.92■□□□□ 0.3
CDKAL1Q5VV42 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDKAL1Q5VV42 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
CDKAL1Q5VV42 GRAMD4P3-201ENST00000621665 1669 ntBASIC16.92■□□□□ 0.3
CDKAL1Q5VV42 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDKAL1Q5VV42 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC16.92■□□□□ 0.3
CDKAL1Q5VV42 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDKAL1Q5VV42 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDKAL1Q5VV42 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
CDKAL1Q5VV42 UPF3AP3-201ENST00000420996 769 ntBASIC16.92■□□□□ 0.3
CDKAL1Q5VV42 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC16.92■□□□□ 0.3
CDKAL1Q5VV42 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC16.92■□□□□ 0.3
CDKAL1Q5VV42 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
CDKAL1Q5VV42 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CDKAL1Q5VV42 AC069262.1-201ENST00000539058 672 ntBASIC16.92■□□□□ 0.3
CDKAL1Q5VV42 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CDKAL1Q5VV42 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
CDKAL1Q5VV42 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CDKAL1Q5VV42 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CDKAL1Q5VV42 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC16.92■□□□□ 0.3
CDKAL1Q5VV42 AC000095.1-201ENST00000603208 874 ntBASIC16.92■□□□□ 0.3
CDKAL1Q5VV42 AC027612.4-201ENST00000605371 583 ntBASIC16.92■□□□□ 0.3
CDKAL1Q5VV42 SPDYE12P-201ENST00000618416 771 ntBASIC16.92■□□□□ 0.3
CDKAL1Q5VV42 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms