Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ATPAF1Q5TC12 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ATPAF1Q5TC12 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
ATPAF1Q5TC12 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC13.56□□□□□ -0.24
ATPAF1Q5TC12 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC13.56□□□□□ -0.24
ATPAF1Q5TC12 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ATPAF1Q5TC12 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ATPAF1Q5TC12 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ATPAF1Q5TC12 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC13.56□□□□□ -0.24
ATPAF1Q5TC12 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
ATPAF1Q5TC12 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ATPAF1Q5TC12 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
ATPAF1Q5TC12 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC13.56□□□□□ -0.24
ATPAF1Q5TC12 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ATPAF1Q5TC12 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ATPAF1Q5TC12 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ATPAF1Q5TC12 UCKL1-AS1-201ENST00000623569 3602 ntBASIC13.56□□□□□ -0.24
ATPAF1Q5TC12 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC13.56□□□□□ -0.24
ATPAF1Q5TC12 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ATPAF1Q5TC12 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC13.56□□□□□ -0.24
ATPAF1Q5TC12 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
ATPAF1Q5TC12 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ATPAF1Q5TC12 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
ATPAF1Q5TC12 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC13.56□□□□□ -0.24
ATPAF1Q5TC12 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC13.56□□□□□ -0.24
ATPAF1Q5TC12 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
ATPAF1Q5TC12 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
ATPAF1Q5TC12 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC13.56□□□□□ -0.24
ATPAF1Q5TC12 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC13.56□□□□□ -0.24
ATPAF1Q5TC12 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC13.56□□□□□ -0.24
ATPAF1Q5TC12 RNA5SP410-201ENST00000516285 106 ntBASIC13.56□□□□□ -0.24
ATPAF1Q5TC12 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ATPAF1Q5TC12 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC13.56□□□□□ -0.24
ATPAF1Q5TC12 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC13.56□□□□□ -0.24
ATPAF1Q5TC12 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
ATPAF1Q5TC12 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
ATPAF1Q5TC12 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ATPAF1Q5TC12 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ATPAF1Q5TC12 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ATPAF1Q5TC12 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
ATPAF1Q5TC12 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
ATPAF1Q5TC12 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC13.56□□□□□ -0.24
ATPAF1Q5TC12 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC13.56□□□□□ -0.24
ATPAF1Q5TC12 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC13.56□□□□□ -0.24
ATPAF1Q5TC12 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
ATPAF1Q5TC12 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ATPAF1Q5TC12 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC13.56□□□□□ -0.24
ATPAF1Q5TC12 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
ATPAF1Q5TC12 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
ATPAF1Q5TC12 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ATPAF1Q5TC12 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC13.56□□□□□ -0.24
ATPAF1Q5TC12 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ATPAF1Q5TC12 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ATPAF1Q5TC12 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
ATPAF1Q5TC12 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ATPAF1Q5TC12 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
ATPAF1Q5TC12 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC13.56□□□□□ -0.24
ATPAF1Q5TC12 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
ATPAF1Q5TC12 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ATPAF1Q5TC12 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
ATPAF1Q5TC12 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
ATPAF1Q5TC12 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ATPAF1Q5TC12 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
ATPAF1Q5TC12 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
ATPAF1Q5TC12 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC13.55□□□□□ -0.24
ATPAF1Q5TC12 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC13.55□□□□□ -0.24
ATPAF1Q5TC12 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC13.55□□□□□ -0.24
ATPAF1Q5TC12 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ATPAF1Q5TC12 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
ATPAF1Q5TC12 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
ATPAF1Q5TC12 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
ATPAF1Q5TC12 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
ATPAF1Q5TC12 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ATPAF1Q5TC12 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC13.55□□□□□ -0.24
ATPAF1Q5TC12 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
ATPAF1Q5TC12 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC13.55□□□□□ -0.24
ATPAF1Q5TC12 DAD1-205ENST00000543337 501 ntTSL 3 BASIC13.55□□□□□ -0.24
ATPAF1Q5TC12 MAX-210ENST00000555419 765 ntTSL 5 BASIC13.55□□□□□ -0.24
ATPAF1Q5TC12 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC13.55□□□□□ -0.24
ATPAF1Q5TC12 AC026150.2-201ENST00000564693 1156 ntBASIC13.55□□□□□ -0.24
ATPAF1Q5TC12 AC018529.1-201ENST00000613063 361 ntBASIC13.55□□□□□ -0.24
ATPAF1Q5TC12 RAB34-224ENST00000636513 888 ntTSL 5 BASIC13.55□□□□□ -0.24
ATPAF1Q5TC12 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
ATPAF1Q5TC12 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC13.55□□□□□ -0.24
ATPAF1Q5TC12 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC13.55□□□□□ -0.24
ATPAF1Q5TC12 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
ATPAF1Q5TC12 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
ATPAF1Q5TC12 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ATPAF1Q5TC12 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
ATPAF1Q5TC12 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC13.55□□□□□ -0.24
ATPAF1Q5TC12 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
ATPAF1Q5TC12 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
ATPAF1Q5TC12 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ATPAF1Q5TC12 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
ATPAF1Q5TC12 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ATPAF1Q5TC12 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
ATPAF1Q5TC12 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
ATPAF1Q5TC12 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
ATPAF1Q5TC12 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
ATPAF1Q5TC12 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 518.2 ms