Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RFX4Q33E94 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC14.51□□□□□ -0.09
RFX4Q33E94 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RFX4Q33E94 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
RFX4Q33E94 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC14.51□□□□□ -0.09
RFX4Q33E94 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
RFX4Q33E94 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC14.51□□□□□ -0.09
RFX4Q33E94 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC14.51□□□□□ -0.09
RFX4Q33E94 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC14.51□□□□□ -0.09
RFX4Q33E94 HSPA7-201ENST00000445535 1927 ntBASIC14.51□□□□□ -0.09
RFX4Q33E94 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC14.51□□□□□ -0.09
RFX4Q33E94 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
RFX4Q33E94 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RFX4Q33E94 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
RFX4Q33E94 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RFX4Q33E94 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RFX4Q33E94 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RFX4Q33E94 AC002056.1-201ENST00000395613 760 ntBASIC14.51□□□□□ -0.09
RFX4Q33E94 AC004987.2-201ENST00000395959 1148 ntBASIC14.51□□□□□ -0.09
RFX4Q33E94 TPM4P1-201ENST00000436100 807 ntBASIC14.51□□□□□ -0.09
RFX4Q33E94 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC14.51□□□□□ -0.09
RFX4Q33E94 AC098859.1-201ENST00000502915 1238 ntBASIC14.51□□□□□ -0.09
RFX4Q33E94 PENK-208ENST00000523051 772 ntTSL 5 BASIC14.51□□□□□ -0.09
RFX4Q33E94 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC14.51□□□□□ -0.09
RFX4Q33E94 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC14.51□□□□□ -0.09
RFX4Q33E94 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
RFX4Q33E94 AC034105.1-201ENST00000563488 319 ntBASIC14.51□□□□□ -0.09
RFX4Q33E94 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC14.51□□□□□ -0.09
RFX4Q33E94 AC068137.2-201ENST00000605408 478 ntBASIC14.51□□□□□ -0.09
RFX4Q33E94 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC14.51□□□□□ -0.09
RFX4Q33E94 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
RFX4Q33E94 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
RFX4Q33E94 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RFX4Q33E94 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RFX4Q33E94 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
RFX4Q33E94 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC14.51□□□□□ -0.09
RFX4Q33E94 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RFX4Q33E94 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RFX4Q33E94 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RFX4Q33E94 AC005840.4-201ENST00000541242 2494 ntBASIC14.51□□□□□ -0.09
RFX4Q33E94 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
RFX4Q33E94 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RFX4Q33E94 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC14.51□□□□□ -0.09
RFX4Q33E94 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
RFX4Q33E94 TKT-201ENST00000296289 1931 ntTSL 5 BASIC14.51□□□□□ -0.09
RFX4Q33E94 OS9-207ENST00000439210 1946 ntTSL 2 BASIC14.51□□□□□ -0.09
RFX4Q33E94 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC14.51□□□□□ -0.09
RFX4Q33E94 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RFX4Q33E94 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC14.5□□□□□ -0.09
RFX4Q33E94 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
RFX4Q33E94 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
RFX4Q33E94 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RFX4Q33E94 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RFX4Q33E94 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
RFX4Q33E94 AC104109.2-201ENST00000602919 1418 ntBASIC14.5□□□□□ -0.09
RFX4Q33E94 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
RFX4Q33E94 AC136759.1-202ENST00000530858 2194 ntBASIC14.5□□□□□ -0.09
RFX4Q33E94 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
RFX4Q33E94 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RFX4Q33E94 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
RFX4Q33E94 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
RFX4Q33E94 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RFX4Q33E94 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
RFX4Q33E94 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RFX4Q33E94 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC14.5□□□□□ -0.09
RFX4Q33E94 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RFX4Q33E94 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC14.5□□□□□ -0.09
RFX4Q33E94 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC14.5□□□□□ -0.09
RFX4Q33E94 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
RFX4Q33E94 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC14.5□□□□□ -0.09
RFX4Q33E94 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC14.5□□□□□ -0.09
RFX4Q33E94 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
RFX4Q33E94 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
RFX4Q33E94 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RFX4Q33E94 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC14.5□□□□□ -0.09
RFX4Q33E94 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
RFX4Q33E94 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC14.5□□□□□ -0.09
RFX4Q33E94 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
RFX4Q33E94 AP002472.1-201ENST00000577490 586 ntBASIC14.5□□□□□ -0.09
RFX4Q33E94 AC024267.1-201ENST00000582320 895 ntBASIC14.5□□□□□ -0.09
RFX4Q33E94 AC073389.1-201ENST00000595595 795 ntBASIC14.5□□□□□ -0.09
RFX4Q33E94 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC14.5□□□□□ -0.09
RFX4Q33E94 AL450472.2-201ENST00000603663 1156 ntBASIC14.5□□□□□ -0.09
RFX4Q33E94 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC14.5□□□□□ -0.09
RFX4Q33E94 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC14.5□□□□□ -0.09
RFX4Q33E94 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RFX4Q33E94 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC14.5□□□□□ -0.09
RFX4Q33E94 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RFX4Q33E94 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
RFX4Q33E94 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
RFX4Q33E94 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC14.5□□□□□ -0.09
RFX4Q33E94 GOLGA2P9-201ENST00000596977 1937 ntBASIC14.5□□□□□ -0.09
RFX4Q33E94 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RFX4Q33E94 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC14.5□□□□□ -0.09
RFX4Q33E94 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC14.5□□□□□ -0.09
RFX4Q33E94 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RFX4Q33E94 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
RFX4Q33E94 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC14.5□□□□□ -0.09
RFX4Q33E94 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC14.5□□□□□ -0.09
RFX4Q33E94 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms