Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RSPO4Q2I0M5 PCDH8P1-201ENST00000428983 2773 ntBASIC14.9□□□□□ -0.02
RSPO4Q2I0M5 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RSPO4Q2I0M5 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
RSPO4Q2I0M5 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC14.9□□□□□ -0.02
RSPO4Q2I0M5 CHMP1AP1-201ENST00000445563 662 ntBASIC14.9□□□□□ -0.02
RSPO4Q2I0M5 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC14.9□□□□□ -0.02
RSPO4Q2I0M5 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC14.9□□□□□ -0.02
RSPO4Q2I0M5 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC14.9□□□□□ -0.02
RSPO4Q2I0M5 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC14.9□□□□□ -0.02
RSPO4Q2I0M5 CMC2-214ENST00000565925 640 ntTSL 5 BASIC14.9□□□□□ -0.02
RSPO4Q2I0M5 PLIN5-202ENST00000586133 907 ntTSL 3 BASIC14.9□□□□□ -0.02
RSPO4Q2I0M5 AC093567.1-201ENST00000590649 877 ntTSL 3 BASIC14.9□□□□□ -0.02
RSPO4Q2I0M5 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC14.9□□□□□ -0.02
RSPO4Q2I0M5 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC14.9□□□□□ -0.02
RSPO4Q2I0M5 AC090164.2-201ENST00000611487 516 ntBASIC14.9□□□□□ -0.02
RSPO4Q2I0M5 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC14.9□□□□□ -0.02
RSPO4Q2I0M5 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RSPO4Q2I0M5 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC14.9□□□□□ -0.02
RSPO4Q2I0M5 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RSPO4Q2I0M5 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RSPO4Q2I0M5 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC14.9□□□□□ -0.02
RSPO4Q2I0M5 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
RSPO4Q2I0M5 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RSPO4Q2I0M5 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RSPO4Q2I0M5 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
RSPO4Q2I0M5 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC14.9□□□□□ -0.02
RSPO4Q2I0M5 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
RSPO4Q2I0M5 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC14.9□□□□□ -0.02
RSPO4Q2I0M5 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RSPO4Q2I0M5 PCDHA14-201ENST00000506751 2298 ntBASIC14.9□□□□□ -0.02
RSPO4Q2I0M5 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RSPO4Q2I0M5 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC14.9□□□□□ -0.02
RSPO4Q2I0M5 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC14.9□□□□□ -0.02
RSPO4Q2I0M5 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
RSPO4Q2I0M5 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RSPO4Q2I0M5 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RSPO4Q2I0M5 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RSPO4Q2I0M5 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RSPO4Q2I0M5 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
RSPO4Q2I0M5 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC14.89□□□□□ -0.03
RSPO4Q2I0M5 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC14.89□□□□□ -0.03
RSPO4Q2I0M5 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
RSPO4Q2I0M5 HLA-A-202ENST00000376806 1854 ntBASIC14.89□□□□□ -0.03
RSPO4Q2I0M5 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RSPO4Q2I0M5 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC14.89□□□□□ -0.03
RSPO4Q2I0M5 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RSPO4Q2I0M5 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RSPO4Q2I0M5 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
RSPO4Q2I0M5 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
RSPO4Q2I0M5 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RSPO4Q2I0M5 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RSPO4Q2I0M5 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RSPO4Q2I0M5 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RSPO4Q2I0M5 AL133267.1-201ENST00000398220 340 ntBASIC14.89□□□□□ -0.03
RSPO4Q2I0M5 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC14.89□□□□□ -0.03
RSPO4Q2I0M5 PUDPP3-201ENST00000445368 636 ntBASIC14.89□□□□□ -0.03
RSPO4Q2I0M5 AC108199.1-201ENST00000504249 508 ntTSL 3 BASIC14.89□□□□□ -0.03
RSPO4Q2I0M5 AL391280.1-201ENST00000506969 1062 ntBASIC14.89□□□□□ -0.03
RSPO4Q2I0M5 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC14.89□□□□□ -0.03
RSPO4Q2I0M5 AC012158.2-201ENST00000536546 354 ntBASIC14.89□□□□□ -0.03
RSPO4Q2I0M5 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC14.89□□□□□ -0.03
RSPO4Q2I0M5 AC007718.1-201ENST00000621078 280 ntBASIC14.89□□□□□ -0.03
RSPO4Q2I0M5 AL161773.1-201ENST00000624845 863 ntBASIC14.89□□□□□ -0.03
RSPO4Q2I0M5 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC14.89□□□□□ -0.03
RSPO4Q2I0M5 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RSPO4Q2I0M5 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RSPO4Q2I0M5 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RSPO4Q2I0M5 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC14.89□□□□□ -0.03
RSPO4Q2I0M5 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC14.89□□□□□ -0.03
RSPO4Q2I0M5 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
RSPO4Q2I0M5 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
RSPO4Q2I0M5 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RSPO4Q2I0M5 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RSPO4Q2I0M5 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC14.89□□□□□ -0.03
RSPO4Q2I0M5 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RSPO4Q2I0M5 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RSPO4Q2I0M5 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
RSPO4Q2I0M5 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
RSPO4Q2I0M5 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
RSPO4Q2I0M5 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
RSPO4Q2I0M5 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC14.88□□□□□ -0.03
RSPO4Q2I0M5 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
RSPO4Q2I0M5 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RSPO4Q2I0M5 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RSPO4Q2I0M5 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
RSPO4Q2I0M5 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RSPO4Q2I0M5 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RSPO4Q2I0M5 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RSPO4Q2I0M5 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC14.88□□□□□ -0.03
RSPO4Q2I0M5 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RSPO4Q2I0M5 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
RSPO4Q2I0M5 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC14.88□□□□□ -0.03
RSPO4Q2I0M5 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
RSPO4Q2I0M5 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
RSPO4Q2I0M5 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
RSPO4Q2I0M5 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RSPO4Q2I0M5 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RSPO4Q2I0M5 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC14.88□□□□□ -0.03
RSPO4Q2I0M5 AC007319.1-201ENST00000453517 802 ntTSL 3 BASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms