Protein–RNA interactions for Protein: Q12986

NFX1, Transcriptional repressor NF-X1, humanhuman

Known RBP Predictions only

Length 1,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFX1Q12986 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC17.05■□□□□ 0.32
NFX1Q12986 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NFX1Q12986 HLA-DQB2-231ENST00000435145 2026 ntBASIC17.05■□□□□ 0.32
NFX1Q12986 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NFX1Q12986 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NFX1Q12986 TEX30-203ENST00000376022 828 ntTSL 2 BASIC17.05■□□□□ 0.32
NFX1Q12986 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NFX1Q12986 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC17.05■□□□□ 0.32
NFX1Q12986 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
NFX1Q12986 BRWD1P1-201ENST00000401091 371 ntBASIC17.05■□□□□ 0.32
NFX1Q12986 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
NFX1Q12986 ACTBP11-201ENST00000436287 1126 ntBASIC17.05■□□□□ 0.32
NFX1Q12986 FO681548.1-201ENST00000455617 1132 ntBASIC17.05■□□□□ 0.32
NFX1Q12986 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC17.05■□□□□ 0.32
NFX1Q12986 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
NFX1Q12986 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC17.05■□□□□ 0.32
NFX1Q12986 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NFX1Q12986 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC17.05■□□□□ 0.32
NFX1Q12986 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC17.05■□□□□ 0.32
NFX1Q12986 AP000812.2-201ENST00000538934 718 ntBASIC17.05■□□□□ 0.32
NFX1Q12986 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NFX1Q12986 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC17.05■□□□□ 0.32
NFX1Q12986 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC17.05■□□□□ 0.32
NFX1Q12986 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC17.05■□□□□ 0.32
NFX1Q12986 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
NFX1Q12986 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NFX1Q12986 TECR-220ENST00000600083 1204 ntTSL 2 BASIC17.05■□□□□ 0.32
NFX1Q12986 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
NFX1Q12986 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NFX1Q12986 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NFX1Q12986 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
NFX1Q12986 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
NFX1Q12986 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NFX1Q12986 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NFX1Q12986 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NFX1Q12986 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
NFX1Q12986 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC17.05■□□□□ 0.32
NFX1Q12986 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NFX1Q12986 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NFX1Q12986 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC17.05■□□□□ 0.32
NFX1Q12986 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NFX1Q12986 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC17.04■□□□□ 0.32
NFX1Q12986 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
NFX1Q12986 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
NFX1Q12986 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
NFX1Q12986 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC17.04■□□□□ 0.32
NFX1Q12986 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC17.04■□□□□ 0.32
NFX1Q12986 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NFX1Q12986 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC17.04■□□□□ 0.32
NFX1Q12986 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC17.04■□□□□ 0.32
NFX1Q12986 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NFX1Q12986 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC17.04■□□□□ 0.32
NFX1Q12986 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NFX1Q12986 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC17.04■□□□□ 0.32
NFX1Q12986 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
NFX1Q12986 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
NFX1Q12986 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
NFX1Q12986 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC17.04■□□□□ 0.32
NFX1Q12986 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC17.04■□□□□ 0.32
NFX1Q12986 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
NFX1Q12986 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NFX1Q12986 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NFX1Q12986 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
NFX1Q12986 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC17.04■□□□□ 0.32
NFX1Q12986 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC17.04■□□□□ 0.32
NFX1Q12986 USB1-203ENST00000539737 1212 ntTSL 2 BASIC17.04■□□□□ 0.32
NFX1Q12986 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC17.04■□□□□ 0.32
NFX1Q12986 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC17.04■□□□□ 0.32
NFX1Q12986 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC17.04■□□□□ 0.32
NFX1Q12986 AC015910.1-201ENST00000579400 975 ntBASIC17.04■□□□□ 0.32
NFX1Q12986 MIR4525-201ENST00000580000 75 ntBASIC17.04■□□□□ 0.32
NFX1Q12986 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC17.04■□□□□ 0.32
NFX1Q12986 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC17.04■□□□□ 0.32
NFX1Q12986 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC17.04■□□□□ 0.32
NFX1Q12986 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
NFX1Q12986 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
NFX1Q12986 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NFX1Q12986 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NFX1Q12986 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NFX1Q12986 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NFX1Q12986 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NFX1Q12986 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NFX1Q12986 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
NFX1Q12986 AGER-206ENST00000375070 1463 ntTSL 5 BASIC17.04■□□□□ 0.32
NFX1Q12986 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
NFX1Q12986 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NFX1Q12986 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
NFX1Q12986 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
NFX1Q12986 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
NFX1Q12986 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
NFX1Q12986 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NFX1Q12986 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NFX1Q12986 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
NFX1Q12986 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NFX1Q12986 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NFX1Q12986 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
NFX1Q12986 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC17.03■□□□□ 0.32
NFX1Q12986 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NFX1Q12986 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
NFX1Q12986 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms