Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC15□□□□□ -0.01
HMGCS1Q01581 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HMGCS1Q01581 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC15□□□□□ -0.01
HMGCS1Q01581 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HMGCS1Q01581 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC15□□□□□ -0.01
HMGCS1Q01581 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
HMGCS1Q01581 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HMGCS1Q01581 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC15□□□□□ -0.01
HMGCS1Q01581 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC15□□□□□ -0.01
HMGCS1Q01581 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
HMGCS1Q01581 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HMGCS1Q01581 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HMGCS1Q01581 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC15□□□□□ -0.01
HMGCS1Q01581 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
HMGCS1Q01581 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC15□□□□□ -0.01
HMGCS1Q01581 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC15□□□□□ -0.01
HMGCS1Q01581 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC15□□□□□ -0.01
HMGCS1Q01581 SLED1-202ENST00000512051 380 ntBASIC15□□□□□ -0.01
HMGCS1Q01581 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC15□□□□□ -0.01
HMGCS1Q01581 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC15□□□□□ -0.01
HMGCS1Q01581 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC15□□□□□ -0.01
HMGCS1Q01581 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC15□□□□□ -0.01
HMGCS1Q01581 AC109322.1-201ENST00000524499 1264 ntBASIC15□□□□□ -0.01
HMGCS1Q01581 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC15□□□□□ -0.01
HMGCS1Q01581 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC15□□□□□ -0.01
HMGCS1Q01581 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC15□□□□□ -0.01
HMGCS1Q01581 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC15□□□□□ -0.01
HMGCS1Q01581 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC15□□□□□ -0.01
HMGCS1Q01581 AL033527.5-202ENST00000641632 1098 ntBASIC15□□□□□ -0.01
HMGCS1Q01581 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC15□□□□□ -0.01
HMGCS1Q01581 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
HMGCS1Q01581 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC15□□□□□ -0.01
HMGCS1Q01581 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HMGCS1Q01581 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HMGCS1Q01581 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC15□□□□□ -0.01
HMGCS1Q01581 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HMGCS1Q01581 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HMGCS1Q01581 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC15□□□□□ -0.01
HMGCS1Q01581 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HMGCS1Q01581 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HMGCS1Q01581 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HMGCS1Q01581 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HMGCS1Q01581 AJ011931.1-201ENST00000618749 2492 ntBASIC15□□□□□ -0.01
HMGCS1Q01581 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC15□□□□□ -0.01
HMGCS1Q01581 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
HMGCS1Q01581 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC14.99□□□□□ -0.01
HMGCS1Q01581 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
HMGCS1Q01581 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HMGCS1Q01581 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
HMGCS1Q01581 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HMGCS1Q01581 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC14.99□□□□□ -0.01
HMGCS1Q01581 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HMGCS1Q01581 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC14.99□□□□□ -0.01
HMGCS1Q01581 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
HMGCS1Q01581 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
HMGCS1Q01581 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC14.99□□□□□ -0.01
HMGCS1Q01581 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HMGCS1Q01581 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC14.99□□□□□ -0.01
HMGCS1Q01581 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
HMGCS1Q01581 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HMGCS1Q01581 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC14.99□□□□□ -0.01
HMGCS1Q01581 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC14.99□□□□□ -0.01
HMGCS1Q01581 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
HMGCS1Q01581 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HMGCS1Q01581 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
HMGCS1Q01581 HNRNPFP1-201ENST00000391730 1133 ntBASIC14.99□□□□□ -0.01
HMGCS1Q01581 RPL5P21-201ENST00000404620 815 ntBASIC14.99□□□□□ -0.01
HMGCS1Q01581 USP40-206ENST00000443711 628 ntTSL 2 BASIC14.99□□□□□ -0.01
HMGCS1Q01581 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HMGCS1Q01581 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC14.99□□□□□ -0.01
HMGCS1Q01581 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
HMGCS1Q01581 AC025048.3-201ENST00000590609 569 ntBASIC14.99□□□□□ -0.01
HMGCS1Q01581 AC005702.4-201ENST00000618393 416 ntBASIC14.99□□□□□ -0.01
HMGCS1Q01581 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC14.99□□□□□ -0.01
HMGCS1Q01581 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC14.99□□□□□ -0.01
HMGCS1Q01581 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HMGCS1Q01581 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HMGCS1Q01581 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
HMGCS1Q01581 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
HMGCS1Q01581 ZBED1P1-201ENST00000502364 1930 ntBASIC14.99□□□□□ -0.01
HMGCS1Q01581 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC14.99□□□□□ -0.01
HMGCS1Q01581 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HMGCS1Q01581 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HMGCS1Q01581 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC14.99□□□□□ -0.01
HMGCS1Q01581 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
HMGCS1Q01581 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HMGCS1Q01581 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HMGCS1Q01581 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
HMGCS1Q01581 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HMGCS1Q01581 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
HMGCS1Q01581 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
HMGCS1Q01581 MROH4P-201ENST00000431302 1578 ntBASIC14.98□□□□□ -0.01
HMGCS1Q01581 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
HMGCS1Q01581 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC14.98□□□□□ -0.01
HMGCS1Q01581 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HMGCS1Q01581 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC14.98□□□□□ -0.01
HMGCS1Q01581 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
HMGCS1Q01581 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
HMGCS1Q01581 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
HMGCS1Q01581 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC14.98□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms