Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
NKX6-1P78426 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
NKX6-1P78426 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
NKX6-1P78426 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
NKX6-1P78426 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
NKX6-1P78426 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC13.78□□□□□ -0.2
NKX6-1P78426 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
NKX6-1P78426 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC13.78□□□□□ -0.2
NKX6-1P78426 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC13.78□□□□□ -0.2
NKX6-1P78426 SPDYE18-201ENST00000510091 1050 ntBASIC13.78□□□□□ -0.2
NKX6-1P78426 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
NKX6-1P78426 SDHAP3-202ENST00000515467 728 ntBASIC13.78□□□□□ -0.2
NKX6-1P78426 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC13.78□□□□□ -0.2
NKX6-1P78426 FUZ-207ENST00000526575 482 ntTSL 4 BASIC13.78□□□□□ -0.2
NKX6-1P78426 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC13.78□□□□□ -0.2
NKX6-1P78426 AC123567.1-201ENST00000548294 1261 ntBASIC13.78□□□□□ -0.2
NKX6-1P78426 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
NKX6-1P78426 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC13.78□□□□□ -0.2
NKX6-1P78426 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC13.78□□□□□ -0.2
NKX6-1P78426 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC13.78□□□□□ -0.2
NKX6-1P78426 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC13.78□□□□□ -0.2
NKX6-1P78426 AC004790.1-201ENST00000612686 536 ntBASIC13.78□□□□□ -0.2
NKX6-1P78426 AL033527.4-201ENST00000641026 673 ntBASIC13.78□□□□□ -0.2
NKX6-1P78426 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
NKX6-1P78426 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
NKX6-1P78426 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC13.78□□□□□ -0.2
NKX6-1P78426 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
NKX6-1P78426 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
NKX6-1P78426 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
NKX6-1P78426 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
NKX6-1P78426 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC13.78□□□□□ -0.2
NKX6-1P78426 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
NKX6-1P78426 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC13.78□□□□□ -0.2
NKX6-1P78426 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
NKX6-1P78426 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
NKX6-1P78426 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
NKX6-1P78426 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC13.78□□□□□ -0.2
NKX6-1P78426 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
NKX6-1P78426 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC13.78□□□□□ -0.2
NKX6-1P78426 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC13.78□□□□□ -0.2
NKX6-1P78426 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
NKX6-1P78426 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
NKX6-1P78426 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
NKX6-1P78426 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
NKX6-1P78426 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
NKX6-1P78426 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
NKX6-1P78426 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
NKX6-1P78426 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.21
NKX6-1P78426 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
NKX6-1P78426 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC13.77□□□□□ -0.21
NKX6-1P78426 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
NKX6-1P78426 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
NKX6-1P78426 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
NKX6-1P78426 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
NKX6-1P78426 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
NKX6-1P78426 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
NKX6-1P78426 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
NKX6-1P78426 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
NKX6-1P78426 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
NKX6-1P78426 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC13.77□□□□□ -0.21
NKX6-1P78426 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
NKX6-1P78426 HIST1H2BPS3-201ENST00000419683 341 ntBASIC13.77□□□□□ -0.21
NKX6-1P78426 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC13.77□□□□□ -0.21
NKX6-1P78426 AC007389.4-201ENST00000454674 793 ntBASIC13.77□□□□□ -0.21
NKX6-1P78426 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC13.77□□□□□ -0.21
NKX6-1P78426 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC13.77□□□□□ -0.21
NKX6-1P78426 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC13.77□□□□□ -0.21
NKX6-1P78426 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC13.77□□□□□ -0.21
NKX6-1P78426 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
NKX6-1P78426 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
NKX6-1P78426 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
NKX6-1P78426 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC13.77□□□□□ -0.21
NKX6-1P78426 MIR4259-201ENST00000584466 101 ntBASIC13.77□□□□□ -0.21
NKX6-1P78426 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
NKX6-1P78426 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
NKX6-1P78426 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
NKX6-1P78426 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
NKX6-1P78426 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC13.77□□□□□ -0.21
NKX6-1P78426 REXO1L6P-201ENST00000603433 1515 ntBASIC13.77□□□□□ -0.21
NKX6-1P78426 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
NKX6-1P78426 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC13.77□□□□□ -0.21
NKX6-1P78426 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC13.77□□□□□ -0.21
NKX6-1P78426 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
NKX6-1P78426 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
NKX6-1P78426 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
NKX6-1P78426 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC13.77□□□□□ -0.21
NKX6-1P78426 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC13.77□□□□□ -0.21
NKX6-1P78426 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
NKX6-1P78426 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
NKX6-1P78426 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.21
NKX6-1P78426 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
NKX6-1P78426 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
NKX6-1P78426 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
NKX6-1P78426 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
NKX6-1P78426 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
NKX6-1P78426 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
NKX6-1P78426 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC13.76□□□□□ -0.21
NKX6-1P78426 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
NKX6-1P78426 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
NKX6-1P78426 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms